Hs01206369_cn

• Gene Symbol: FAM178B
• Assay Reference Genome Location: Chr.2:96877947 on build GRCh38
• Cytoband: 2q11.2

Target Gene Details

• Entrez Gene ID: 51252
• Gene Name: family with sequence similarity 178 member B
• Gene Aliases: -
• Location: Chr.2:96875882-96986600 on Build GRCh38
• Assay Gene Location: Within Exon 21

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM178B	NM_001122646.2	16	2201	NP_001116118.2
	NM_001172667.1	4	402	NP_001166138.1
	NM_016490.4	4	520	NP_057574.2
	XM_011511294.2	15	2129	XP_011509596.1
	XM_017004263.1	17	2366	XP_016859752.1
	XM_017004264.1	17	2327	XP_016859753.1
	XM_017004266.1	7	774	XP_016859755.1
	XM_017004267.1	4	379	XP_016859756.1
	XM_017004268.1	4	405	XP_016859757.1
	AF151068.1	4	355	AAF36154.1
	AK122705.1	10	1080
	AK308698.1	10	1083
	BC038583.1	4	481	AAH38583.3
	BC039488.1	14	1468	AAH39488.1
	BC051379.1	4	520	AAH51379.1
	BX103404.1	4	380

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv526313	Chr.2:96667755 - 96994882 on Build GRCh38	Loss	ANKRD23 SEMA4C FER1L5 CNNM4 ANKRD39 CNNM3 FAM178B LOC101927053 LMAN2L MIR3127
dgv607e201	Chr.2:95855884 - 97561622 on Build GRCh38	Deletion	ANKRD23 CNNM4 ANKRD39 ADRA2B STARD7 SNRNP200 ARID5A ANKRD36 ASTL STARD7-AS1 NCAPH CNNM3 LOC107984110 TMEM127 LOC100506123 DUSP2 LOC105373495 SEMA4C FER1L5 ANKRD36C LOC653924 FAM178B LOC101927053 MIR3127 GPAT2 FAHD2B CIAO1 NEURL3 FAHD2CP LMAN2L LOC100506076 ITPRIPL1 ANKRD36B LOC105373496 KANSL3
nsv1135873	Chr.2:95981454 - 97579645 on Build GRCh38	Deletion	ANKRD23 CNNM4 ANKRD39 ADRA2B STARD7 SNRNP200 ARID5A ANKRD36 ASTL STARD7-AS1 NCAPH CNNM3 LOC107984110 TMEM127 LOC100506123 DUSP2 LOC105373495 SEMA4C FER1L5 ANKRD36C LOC653924 FAM178B LOC101927053 MIR3127 GPAT2 FAHD2B CIAO1 NEURL3 FAHD2CP LMAN2L LOC100506076 ITPRIPL1 ANKRD36B LOC105373496 KANSL3
esv3425717	Chr.2:95859900 - 97515905 on Build GRCh38	Duplication	ANKRD23 CNNM4 ANKRD39 ADRA2B STARD7 SNRNP200 ARID5A ANKRD36 ASTL STARD7-AS1 NCAPH CNNM3 LOC107984110 TMEM127 LOC100506123 DUSP2 LOC105373495 SEMA4C FER1L5 ANKRD36C LOC653924 FAM178B LOC101927053 MIR3127 GPAT2 FAHD2B CIAO1 NEURL3 FAHD2CP LMAN2L LOC100506076 ITPRIPL1 ANKRD36B LOC105373496 KANSL3

More Information

Additional Information:

For this assay, SNP(s) [rs574726843] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation