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See other GFER CNV Assays ›
Gene Symbol
GFER
Assay Reference Genome
Location

Chr.16:1987634 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01207622_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2671

Gene Name:

 growth factor, augmenter of liver regeneration

Gene Aliases:

 ALR, ERV1, HERV1, HPO, HPO1, HPO2, HSS

Location:

 Chr.16:1984149-1987749 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GFER NM_005262.2 3 2294 NP_005253.3
BC002429.1 3 2230 AAH02429.1
BC028348.2 3 2221 AAH28348.2
U31176.1 3 2135 AAA96390.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TSC2 LOC105371047 LMF1 HBA1 LOC107987233 MCRIP2 MSLN ARHGDIG MIR662 SNORA78 LOC652276 C1QTNF8 POLR3K ECI1 DDX11L10 HBM SNRNP25 CLCN7 LMF1-AS1 NHLRC4 GNG13 RPL3L TRAF7 MLST8 SNHG19 SSTR5 PRSS29P RPL23AP5 NME3 ERVK13-1 C16orf91 MRPS34 FAM234A MSRB1 HBZ PRR35 STUB1 MRPL28 HBQ1 DNASE1L2 HAGHL TSR3 SNORD60 LOC105371184 FAHD1 HBA2 DECR2 MIR6767 GNPTG CHTF18 CACNA1H NARFL LOC105371046 MIR1225 METTL26 NME4 MIR3677 SOX8 METRN HS3ST6 NUBP2 MIR6859-4 MAPK8IP3 TELO2 PRSS27 CASKIN1 UNKL PIGQ PKD1 PGP LINC00235 IFT140 LOC101929280 NTN3 LOC729652 MIR6768 MIR6511B1 CCDC78 MEIOB MPG TPSD1 LINC00254 MIR4516 TPSB2 SSTR5-AS1 TBL3 RAB11FIP3 NDUFB10 HAGH TPSG1 PRR25 C16orf59 SPSB3 ATP6V0C RNF151 CRAMP1 UBE2I PTX4 RGS11 SNHG9 WFIKKN1 LOC105371049 MIR940 RHBDL1 LOC105371038 ABCA17P WDR24 SNORA10 TMEM204 CEMP1 KCTD5 NPW JMJD8 LOC107984876 IGFALS NTHL1 AXIN1 BRICD5 RAB40C RAB26 MIR3177 SYNGR3 LOC105371045 MIR4717 WASIR2 CAPN15 MIR3178 WDR90 HN1L PDIA2 LOC100287175 NPRL3 LOC106660606 RNPS1 NOXO1 TMEM8A TPSAB1 MIR3176 MIR5587 CCDC154 LUC7L RHOT2 PDPK1 CCNF ABCA3 SNORA64 FLJ42627 FBXL16 BAIAP3 ZNF598 TBC1D24 GFER E4F1 LOC100134368 MIR3180-5 SLC9A3R2 RPS2 RHBDF1 FAM173A EME2 RPUSD1 AMDHD2
nsv521569 Chr.16:1971892 - 2035996 on Build GRCh38 Loss ZNF598 NPW SYNGR3 GFER TBL3 SLC9A3R2 NOXO1
dgv4858n54 Chr.16:1955562 - 2038584 on Build GRCh38 Loss SYNGR3 TBL3 NDUFB10 SNORA10 SNORA78 SNORA64 RNF151 ZNF598 NPW GFER SNHG9 SLC9A3R2 RPS2 NOXO1
nsv952901 Chr.16:1888800 - 2135899 on Build GRCh38 Deletion MIR4516 SYNGR3 TSC2 TBL3 NDUFB10 SNORA10 RPL3L PKD1 SNORA78 SNORA64 RNF151 ZNF598 NPW GFER SNHG9 LOC105371049 MSRB1 NTHL1 SLC9A3R2 RPS2 MIR6511B1 MIR1225 NOXO1 HS3ST6
nsv1160329 Chr.16:1961727 - 2128574 on Build GRCh38 Deletion SYNGR3 TSC2 TBL3 NDUFB10 SNORA10 PKD1 SNORA78 SNORA64 RNF151 ZNF598 NPW GFER SNHG9 LOC105371049 NTHL1 SLC9A3R2 RPS2 MIR6511B1 MIR1225 NOXO1
nsv471070 Chr.16:1947613 - 2024218 on Build GRCh38 Gain SYNGR3 TBL3 NDUFB10 SNORA10 RPL3L SNORA78 SNORA64 RNF151 ZNF598 NPW GFER SNHG9 RPS2 NOXO1
dgv336n27 Chr.16:1965120 - 2038584 on Build GRCh38 Loss RNF151 ZNF598 NPW SYNGR3 GFER SNHG9 TBL3 SLC9A3R2 NOXO1 SNORA78

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