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See other CLCN7 CNV Assays ›
Gene Symbol
CLCN7
Assay Reference Genome
Location

Chr.16:1447506 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01210709_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 1186

Gene Name:

 chloride voltage-gated channel 7

Gene Aliases:

 CLC-7, CLC7, OPTA2, OPTB4, PPP1R63

Location:

 Chr.16:1444933-1475084 on Build GRCh38

Assay Gene Location:

 Within Exon 24
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CLCN7 NM_001114331.2 22 2174 NP_001107803.1
NM_001287.5 23 2246 NP_001278.1
XM_011522354.1 23 2328 XP_011520656.1
AF224741.1 23 2174 AAF34711.1
AK056551.1 22 2115
AK096963.1 5 1171
AK122944.1 23 2762
AK128285.1 7 2160
AK130196.1 1 78
AK291404.1 23 2189
AK292136.1 22 2096
AK304796.1 23 2039
AK315978.1 24 2069
BC004946.1 6 506 AAH04946.1
BC006158.1 12 1081 AAH06158.1
BC012737.2 23 2173 AAH12737.1
BC109196.1 4 334 AAI09197.1
Z67743.1 23 2088 CAA91556.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571161 Chr.16:1431019 - 1457987 on Build GRCh38 Gain CLCN7 LOC105371045 CCDC154
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain UBE2I TELO2 BAIAP3 PTX4 IFT140 TSR3 CLCN7 LOC105371045 GNPTG C16orf91 UNKL CCDC154
nsv471068 Chr.16:1439259 - 1460566 on Build GRCh38 Gain CLCN7 CCDC154
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RPUSD1 UBE2I HBA1 FAM234A MPG HBM C16orf91 E4F1 PRSS29P MIR6767 FAM173A MAPK8IP3 MIR662 HBA2 HN1L TPSG1 SNHG9 ECI1 LOC105371184 WASIR2 MIR6859-4 MIR6768 LOC729652 TMEM204 EME2 SSTR5-AS1 AMDHD2 ABCA17P SPSB3 SYNGR3 RHBDL1 MIR4516 RPS2 MIR5587 RHBDF1 LOC105371046 LINC00235 LMF1 SNHG19 RNPS1 NPRL3 NME3 NARFL LOC100287175 HAGHL PIGQ ABCA3 TBC1D24 METTL26 MIR6511B1 LOC105371038 WDR90 RAB26 CCDC78 PGP SNORD60 LOC105371045 CASKIN1 GNPTG MIR3180-5 NHLRC4 HAGH FAHD1 WFIKKN1 WDR24 NTN3 GFER MCRIP2 MIR3177 RPL3L PTX4 SNORA10 ATP6V0C MIR940 POLR3K RNF151 HBZ MIR3178 LUC7L C16orf59 TSC2 RPL23AP5 FBXL16 LOC107984876 GNG13 MSLN CCDC154 PRSS27 PRR25 TBL3 HS3ST6 CEMP1 MIR4717 SNORA78 SNRNP25 ERVK13-1 CAPN15 MIR3176 MLST8 RHOT2 MRPS34 PDPK1 RAB11FIP3 MSRB1 ARHGDIG LOC652276 SLC9A3R2 TPSAB1 TPSB2 MEIOB BAIAP3 IFT140 NPW JMJD8 CRAMP1 NME4 PRR35 DDX11L10 DECR2 LINC00254 TPSD1 STUB1 LOC101929280 AXIN1 CHTF18 FLJ42627 SNORA64 CACNA1H TMEM8A LOC106660606 NUBP2 LOC105371047 LOC100134368 METRN IGFALS HBQ1 TRAF7 NTHL1 UNKL PDIA2 KCTD5 LMF1-AS1 NOXO1 TSR3 LOC105371049 CCNF SSTR5 C1QTNF8 NDUFB10 DNASE1L2 BRICD5 RAB40C SOX8 MRPL28 PKD1 MIR1225 TELO2 ZNF598 RGS11 CLCN7 MIR3677 LOC107987233
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss UBE2I LMF1-AS1 TSR3 TPSD1 LOC107984876 SSTR5 SSTR5-AS1 C1QTNF8 C16orf91 CCDC154 PRSS29P CACNA1H TPSAB1 TPSB2 SOX8 BAIAP3 TPSG1 CLCN7 LOC105371045 GNPTG LMF1 UNKL
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion UBE2I TMEM204 TSR3 TPSD1 C16orf91 CCDC154 PRSS29P CACNA1H TPSAB1 TPSB2 LOC105371047 TELO2 BAIAP3 PTX4 IFT140 TPSG1 CLCN7 LOC105371045 GNPTG UNKL
nsv817713 Chr.16:1426464 - 1460566 on Build GRCh38 Loss CLCN7 LOC105371045 CCDC154
nsv819844 Chr.16:1401518 - 1457987 on Build GRCh38 Gain CLCN7 LOC105371045 C16orf91 UNKL CCDC154

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