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See other PIGQ CNV Assays ›
Gene Symbol
PIGQ
Assay Reference Genome
Location

Chr.16:582895 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01215523_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9091

Gene Name:

 phosphatidylinositol glycan anchor biosynthesis class Q

Gene Aliases:

 GPI1, c407A10.1

Location:

 Chr.16:569968-584136 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 10 - Exon 11
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIGQ NM_004204.3 NP_004195.2
NM_148920.2 NP_683721.1
AB003723.1 BAA24948.1
AF030177.1 AAC32661.1
AK055163.1
AK092073.1
AK300297.1
AK314361.1
BC006377.2 AAH06377.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833113 Chr.16:506513 - 628160 on Build GRCh38 Loss MIR3176 RAB40C LOC107987233 NHLRC4 RAB11FIP3 CAPN15 PIGQ LINC00235 MIR5587 PRR35 LOC101929280
esv3637579 Chr.16:574322 - 585512 on Build GRCh38 Loss PIGQ
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PRSS29P C16orf59 LUC7L C1QTNF8 NPW SPSB3 TBL3 POLR3K FAM234A MPG HBQ1 BAIAP3 TMEM204 FLJ42627 RAB11FIP3 TSC2 RNF151 PRR35 CHTF18 KCTD5 NME3 MIR1225 ABCA17P NTHL1 CCDC78 ATP6V0C MSRB1 MSLN TPSAB1 MIR3176 MIR6768 TBC1D24 LOC105371049 AXIN1 E4F1 MIR6767 LINC00235 HAGH MIR3177 HBZ SSTR5-AS1 MEIOB NPRL3 GFER CRAMP1 LMF1 MIR3178 LOC106660606 MRPL28 LOC729652 IFT140 HAGHL MIR3180-5 HBA1 LINC00254 RHOT2 SNHG9 NME4 CEMP1 HBM SNORA10 SNORA64 ABCA3 MIR3677 RPUSD1 PRR25 NOXO1 ZNF598 RPL23AP5 PGP UBE2I LOC105371047 HS3ST6 LOC105371184 SSTR5 MRPS34 PKD1 LOC105371046 LOC105371038 PDIA2 MIR5587 FAHD1 NARFL LOC100134368 WASIR2 SNORA78 HBA2 MCRIP2 FBXL16 JMJD8 UNKL WFIKKN1 TPSB2 LOC107987233 MIR6859-4 C16orf91 DECR2 ECI1 TPSG1 CACNA1H SNORD60 GNPTG RAB26 CCNF SYNGR3 RGS11 RAB40C TMEM8A LOC652276 METRN CLCN7 HN1L RHBDF1 BRICD5 MIR940 SNRNP25 LOC105371045 TSR3 CCDC154 FAM173A TELO2 RHBDL1 IGFALS AMDHD2 NHLRC4 PRSS27 TPSD1 NDUFB10 PIGQ TRAF7 EME2 RPL3L LOC100287175 DNASE1L2 LOC107984876 MLST8 LMF1-AS1 SNHG19 RNPS1 SLC9A3R2 MIR4516 RPS2 PTX4 NUBP2 GNG13 MIR4717 METTL26 MIR6511B1 SOX8 STUB1 NTN3 PDPK1 LOC101929280 MIR662 ERVK13-1 CAPN15 WDR24 CASKIN1 ARHGDIG DDX11L10 WDR90 MAPK8IP3
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss NHLRC4 MCRIP2 PIGQ FBXL16 HAGHL JMJD8 WFIKKN1 LOC100287175 RHOT2 LOC107987233 RAB11FIP3 PRR35 CHTF18 GNG13 RAB40C METTL26 RPUSD1 PRR25 METRN STUB1 CCDC78 LOC101929280 MSLN LOC105371184 MIR3176 MIR662 CAPN15 LOC105371038 WDR24 LINC00235 MIR5587 FAM173A WDR90 NARFL RHBDL1
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss NHLRC4 MCRIP2 PIGQ FBXL16 HAGHL JMJD8 WFIKKN1 LOC100287175 RHOT2 LOC107987233 RAB11FIP3 PRR35 CHTF18 GNG13 RAB40C METTL26 RPUSD1 PRR25 METRN STUB1 CCDC78 LOC101929280 MSLN LOC105371184 MIR3176 MIR662 CAPN15 LOC105371038 WDR24 LINC00235 MIR5587 FAM173A WDR90 NARFL RHBDL1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion NHLRC4 LMF1 MCRIP2 PIGQ C1QTNF8 FBXL16 HAGHL JMJD8 WFIKKN1 LOC100287175 RHOT2 LOC107987233 LOC107984876 LMF1-AS1 RAB11FIP3 PRR35 CHTF18 GNG13 RAB40C METTL26 RPUSD1 PRR25 METRN SOX8 STUB1 CCDC78 LOC101929280 MSLN LOC105371184 MIR3176 SSTR5 MIR662 CAPN15 LOC105371038 WDR24 LINC00235 MIR5587 SSTR5-AS1 FAM173A WDR90 NARFL RHBDL1
dgv4823n54 Chr.16:562698 - 662867 on Build GRCh38 Loss WFIKKN1 LOC100287175 RAB40C LOC107987233 NHLRC4 METTL26 LOC105371038 MCRIP2 PIGQ PRR35 LOC101929280 WDR90
nsv457304 Chr.16:554554 - 611142 on Build GRCh38 Gain RAB40C LOC107987233 NHLRC4 CAPN15 PIGQ PRR35 LOC101929280
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication MCRIP2 PIGQ FBXL16 HAGHL JMJD8 WFIKKN1 LOC100287175 RHOT2 CHTF18 GNG13 RAB40C METTL26 RPUSD1 METRN STUB1 CCDC78 LOC101929280 MSLN LOC105371184 MIR662 LOC105371038 WDR24 FAM173A WDR90 NARFL RHBDL1
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication NHLRC4 MCRIP2 PIGQ FBXL16 HAGHL JMJD8 WFIKKN1 LOC100287175 RHOT2 LOC107987233 RAB11FIP3 PRR35 CHTF18 GNG13 RAB40C METTL26 RPUSD1 PRR25 METRN STUB1 CCDC78 LOC101929280 MSLN LOC105371184 MIR3176 MIR662 CAPN15 LOC105371038 WDR24 LINC00235 MIR5587 FAM173A WDR90 NARFL RHBDL1

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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