Hs01217263_cn

• Gene Symbol: FAM189B
• Assay Reference Genome Location: Chr.1:155254864 on build GRCh38
• Cytoband: 1q22

Target Gene Details

• Entrez Gene ID: 10712
• Gene Name: family with sequence similarity 189 member B
• Gene Aliases: C1orf2, COTE1
• Location: Chr.1:155247205-155255483 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
FAM189B	NM_001267608.1	1	620	NP_001254537.1
	NM_006589.2	1	620	NP_006580.2
	NM_198264.1	1	620	NP_937995.1
	XM_005244845.1	1	614	XP_005244902.1
	AK093335.1	1	620
	BC006493.2	1	100	AAH06493.1
	BC007444.2	1	100	AAH07444.1
	BC008854.2	1	484	AAH08854.1
	BC010471.1	1	524	AAH10471.1
	BC017262.2	1	328	AAH17262.1
	BC040136.1	1	97	AAH40136.2

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831636	Chr.1:155249432 - 155475073 on Build GRCh38	Loss	ASH1L RUSC1 FDPS SCAMP3 PKLR MIR555 POU5F1P4 HCN3 FAM189B CLK2 LOC105371451 RUSC1-AS1
nsv470741	Chr.1:155142784 - 155260340 on Build GRCh38	Loss	MIR92B SCAMP3 TRIM46 MTX1 GBAP1 GBA KRTCAP2 MUC1 FAM189B THBS3
esv33869	Chr.1:155253492 - 155948170 on Build GRCh38	Loss	ASH1L FDPS SCARNA26B PKLR GON4L KIAA0907 DAP3 FAM189B CLK2 POU5F1P4 ASH1L-AS1 HCN3 SYT11 LOC100505728 YY1AP1 RIT1 MSTO1 MSTO2P ARHGEF2 SCARNA4 SCARNA26A SNORA80E RUSC1 SCAMP3 MIR555 RXFP4 LOC105371451 RUSC1-AS1
nsv1011773	Chr.1:155219357 - 155265030 on Build GRCh38	Gain	SCAMP3 GBAP1 GBA FAM189B CLK2
dgv3n68	Chr.1:155122502 - 155343618 on Build GRCh38	Loss	SLC50A1 ASH1L FDPS PKLR GBAP1 KRTCAP2 FAM189B CLK2 EFNA1 MIR92B RUSC1 SCAMP3 TRIM46 MTX1 DPM3 GBA HCN3 MUC1 LOC105371451 RUSC1-AS1 THBS3

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

biological_process

Function(s)

protein binding
WW domain binding