Hs01218815_cn

• Gene Symbol: CLEC4C
• Assay Reference Genome Location: Chr.12:7747329 on build GRCh38
• Cytoband: 12p13.31

Target Gene Details

• Entrez Gene ID: 170482
• Gene Name: C-type lectin domain family 4 member C
• Gene Aliases: BDCA2, CD303, CLECSF11, CLECSF7, DLEC, HECL, PRO34150
• Location: Chr.12:7729245-7749473 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CLEC4C	NM_130441.2			NP_569708.1
	NM_203503.1			NP_987099.1
	XM_017018940.1			XP_016874429.1
	AF293615.1			AAL37036.1
	AF325459.1			AAL37358.1
	AF325460.1			AAL37359.1
	AK122596.1
	AY358223.1			AAQ88590.1
	BC074967.2			AAH74967.1
	BC074968.2			AAH74968.1
	BC102015.1			AAI02016.1
	BC102016.1			AAI02017.1
	BC102017.1			AAI02018.1
	BC114338.1			AAI14339.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2759877	Chr.12:7704223 - 8471391 on Build GRCh38	Gain+Loss	FAM86FP NANOG FAM66C FOXJ2 C3AR1 SLC2A3 NANOGP1 POU5F1P3 FAM90A1 CLEC4C DPPA3 NANOGNB SLC2A14 CLEC6A CLEC4A NECAP1 LINC00937 LOC101927905 ZNF705A
esv2422393	Chr.12:7682970 - 7834994 on Build GRCh38	Duplication	NANOGNB NANOG SLC2A14 CLEC4C GDF3 DPPA3
esv3892131	Chr.12:7721803 - 7835165 on Build GRCh38	Gain	NANOGNB NANOG SLC2A14 CLEC4C
dgv6e196	Chr.12:7670828 - 7920436 on Build GRCh38	Duplication	NANOGNB NANOG SLC2A14 SLC2A3 NANOGP1 CLEC4C GDF3 DPPA3
dgv57e55	Chr.12:7700916 - 7963472 on Build GRCh38	Gain	NANOGNB NANOG SLC2A14 SLC2A3 NANOGP1 CLEC4C DPPA3
dgv5e196	Chr.12:7621924 - 7954221 on Build GRCh38	Duplication	NANOGNB NANOG SLC2A14 SLC2A3 NANOGP1 CLEC4C GDF3 APOBEC1 DPPA3

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane traffic protein

Gene Ontology Categories:

Process(es)

stimulatory C-type lectin receptor signaling pathway
adaptive immune response
innate immune response

Function(s)

carbohydrate binding