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See other TJP1 CNV Assays ›
Gene Symbol
TJP1
Assay Reference Genome
Location

Chr.15:29701653 on build GRCh38
Cytoband
15q13.1
Assay ID Hs01232469_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7082

Gene Name:

 tight junction protein 1

Gene Aliases:

 ZO-1

Location:

 Chr.15:29699367-29968919 on Build GRCh38

Assay Gene Location:

 Within Exon 33
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TJP1 NM_001301025.1 29 5488 NP_001287954.1
NM_001301026.1 28 5263 NP_001287955.1
NM_003257.4 28 5664 NP_003248.3
NM_175610.3 27 5424 NP_783297.2
XM_005254617.3 29 5548 XP_005254674.2
XM_005254618.3 28 5355 XP_005254675.1
XM_005254619.3 28 5368 XP_005254676.2
XM_005254620.3 28 5308 XP_005254677.2
XM_011521972.2 29 5569 XP_011520274.2
XM_017022521.1 30 5659 XP_016878010.1
XM_017022522.1 30 5620 XP_016878011.1
XM_017022523.1 30 5599 XP_016878012.1
XM_017022524.1 29 5419 XP_016878013.1
XM_017022525.1 29 5421 XP_016878014.1
XM_017022526.1 29 5406 XP_016878015.1
XM_017022527.1 29 5447 XP_016878016.1
XM_017022528.1 28 5331 XP_016878017.1
XM_017022529.1 28 5316 XP_016878018.1
XM_017022530.1 27 5115 XP_016878019.1
XM_017022531.1 30 5489 XP_016878020.1
AB370197.1 27 5228
AK302971.1 9 2289
AK304758.1 28 5295
BC111712.1 28 5566 AAI11713.1
BX640879.1 28 5264 CAE45936.1
CR749235.1 20 4017 CAH18091.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1040778 Chr.15:28689598 - 30515727 on Build GRCh38 Loss LOC100130111 LOC101060569 PDCD6IPP2 APBA2 GOLGA6L7P NSMCE3 LOC105370746 GOLGA8M FAM189A1 GOLGA8J GOLGA8R DKFZP434L187 LOC100289656 GOLGA8T ULK4P3 LOC105370751 LOC107984752 CHRFAM7A TJP1 WHAMMP2
nsv832945 Chr.15:29640395 - 29831518 on Build GRCh38 Gain LOC100130111 TJP1
nsv527255 Chr.15:28754022 - 30074044 on Build GRCh38 Gain LOC100289656 LOC100130111 PDCD6IPP2 APBA2 GOLGA6L7P NSMCE3 FAM189A1 LOC107984752 TJP1 WHAMMP2
esv2751526 Chr.15:28724519 - 30687025 on Build GRCh38 Loss LOC100288637 LOC100130111 LOC101060569 PDCD6IPP2 APBA2 NSMCE3 FAM189A1 GOLGA8R DKFZP434L187 LOC105370751 ARHGAP11B CHRFAM7A ULK4P2 GOLGA8H GOLGA6L7P LOC105370746 GOLGA8J LOC100289656 LOC100996413 GOLGA8T ULK4P3 LOC107984752 LOC101927579 TJP1 WHAMMP2
nsv1039798 Chr.15:28724126 - 30158154 on Build GRCh38 Gain LOC100130111 PDCD6IPP2 APBA2 GOLGA6L7P NSMCE3 FAM189A1 GOLGA8J LOC100289656 GOLGA8T ULK4P3 LOC107984752 TJP1 WHAMMP2
nsv568675 Chr.15:29035149 - 29916451 on Build GRCh38 Gain LOC100130111 APBA2 NSMCE3 FAM189A1 TJP1
nsv832944 Chr.15:29568858 - 29789854 on Build GRCh38 Gain+Loss LOC100130111 FAM189A1 TJP1

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