Hs01233601_cn

• Gene Symbol: NDST2
• Assay Reference Genome Location: Chr.10:73808698 on build GRCh38
• Cytoband: 10q22.2

Target Gene Details

• Entrez Gene ID: 8509
• Gene Name: N-deacetylase and N-sulfotransferase 2
• Gene Aliases: HSST2, NST2
• Location: Chr.10:73801911-73811831 on Build GRCh38
• Assay Gene Location: Overlaps Intron 3 - Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NDST2	NM_003635.3			NP_003626.1
	XM_005270255.3			XP_005270312.1
	XM_011540310.2			XP_011538612.1
	XM_017016857.1			XP_016872346.1
	AK293527.1
	AK303648.1
	BC035711.1			AAH35711.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv46n21	Chr.10:73790158 - 73933937 on Build GRCh38	Loss	ZSWIM8-AS1 C10orf55 CAMK2G NDST2 PLAU ZSWIM8
nsv551517	Chr.10:73799109 - 73898823 on Build GRCh38	Loss	ZSWIM8-AS1 CAMK2G NDST2 ZSWIM8
nsv1035634	Chr.10:73724401 - 73907300 on Build GRCh38	Gain	ZSWIM8-AS1 BMS1P4 SEC24C CHCHD1 GLUD1P3 CAMK2G FUT11 NDST2 ZSWIM8
nsv831912	Chr.10:73649351 - 73840445 on Build GRCh38	Gain	ZSWIM8-AS1 BMS1P4 SEC24C CHCHD1 GLUD1P3 CAMK2G FUT11 NDST2 ZSWIM8 SYNPO2L AGAP5
nsv825468	Chr.10:73715689 - 73922563 on Build GRCh38	Gain	ZSWIM8-AS1 C10orf55 BMS1P4 SEC24C CHCHD1 GLUD1P3 CAMK2G FUT11 NDST2 PLAU ZSWIM8
nsv551516	Chr.10:73749515 - 73847410 on Build GRCh38	Loss	ZSWIM8-AS1 SEC24C CHCHD1 CAMK2G FUT11 NDST2 ZSWIM8

More Information

Additional Information:

For this assay, SNP(s) [rs73276605] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transferase

Gene Ontology Categories:

Process(es)

glycosaminoglycan biosynthetic process
heparan sulfate proteoglycan biosynthetic process
heparin biosynthetic process

Function(s)

[heparan sulfate]-glucosamine N-sulfotransferase activity
N-acetylglucosamine deacetylase activity