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See other GRIN1 CNV Assays ›
Gene Symbol
GRIN1
Assay Reference Genome
Location

Chr.9:137139600 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01251270_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 2902

Gene Name:

 glutamate ionotropic receptor NMDA type subunit 1

Gene Aliases:

 GluN1, MRD8, NMD-R1, NMDA1, NMDAR1, NR1

Location:

 Chr.9:137139092-137168762 on Build GRCh38

Assay Gene Location:

 Within Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GRIN1 NM_000832.6 1 444 NP_000823.4
NM_001185090.1 1 444 NP_001172019.1
NM_001185091.1 1 444 NP_001172020.1
NM_007327.3 1 444 NP_015566.1
NM_021569.3 1 444 NP_067544.1
XM_005266071.3 1 114 XP_005266128.1
XM_005266072.3 1 448 XP_005266129.1
XM_005266073.4 1 509 XP_005266130.1
XM_011518583.2 1 448 XP_011516885.1
AB208918.1 1 191 BAD92155.1
AB208999.1 1 426 BAD92236.1
AF015730.1 1 187 AAB67723.1
AF015731.1 1 185 AAB67724.1
D13515.1 1 285 BAA02732.1
L05666.1 1 131 AAA21180.1
L13266.1 1 1211 AAB59360.1
L13268.1 1 84 AAB59361.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss LOC101930307 C9orf139 TMEM210 SAPCD2 FUT7 C9orf142 NPDC1 MAN1B1-AS1 ABCA2 LCNL1 MAN1B1 PRR31 CLIC3 ENTPD2 GRIN1 MIR3621 PTGDS UAP1L1 LRRC26 DPP7
nsv616007 Chr.9:137079368 - 137240666 on Build GRCh38 Loss ANAPC2 LOC101930307 TMEM210 RNF208 CYSRT1 TMEM203 MAN1B1-AS1 TPRN MAN1B1 NDOR1 RNF224 GRIN1 MIR3621 SLC34A3 SSNA1 UAP1L1 LRRC26 DPP7
nsv831761 Chr.9:137049674 - 137166473 on Build GRCh38 Loss MAN1B1-AS1 LOC101930307 MAN1B1 SAPCD2 ENTPD2 GRIN1 UAP1L1 DPP7
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss ANAPC2 LOC101930307 NOXA1 RNF208 FUT7 NRARP MAN1B1-AS1 EDF1 MAN1B1 RNF224 NSMF ENTPD2 SSNA1 UAP1L1 DPP7 NELFB FBXW5 TMEM210 C9orf142 CCDC183 EXD3 TOR4A ABCA2 NDOR1 CLIC3 C8G ENTPD8 GRIN1 MIR3621 LRRC26 FAM166A C9orf139 RABL6 STPG3 CYSRT1 PNPLA7 MIR4479 C9orf173-AS1 TMEM203 PHPT1 CCDC183-AS1 TRAF2 MAMDC4 LCN12 TUBB4B PRR31 SLC34A3 PTGDS SAPCD2 NPDC1 MIR4292 MIR7114 TPRN LCNL1 C9orf172
nsv951207 Chr.9:137136949 - 137379148 on Build GRCh38 Deletion ANAPC2 NELFB TMEM210 RNF208 STPG3 CYSRT1 C9orf173-AS1 TMEM203 NRARP EXD3 TOR4A TPRN TUBB4B NDOR1 RNF224 GRIN1 MIR3621 SLC34A3 SSNA1 LRRC26 FAM166A
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss LOC101930307 FUT7 C9orf163 MIR126 LOC100128593 MAN1B1-AS1 EDF1 MAN1B1 HSPC324 ENTPD2 FAM69B UAP1L1 DPP7 SNAPC4 FBXW5 TMEM210 SNORA17B C9orf142 SNHG7 LCN10 CARD9 MIR4673 CCDC183 ABCA2 NALT1 CLIC3 C8G GRIN1 MIR3621 LINC01451 LRRC26 LCN15 C9orf139 RABL6 MIR4479 PHPT1 MIR6722 CCDC183-AS1 LCN8 TRAF2 MAMDC4 LCN12 PRR31 SNORA17A TMEM141 PMPCA PTGDS DNLZ SAPCD2 SDCCAG3 AGPAT2 NPDC1 EGFL7 MIR4292 LCN6 INPP5E SEC16A NOTCH1 MIR4674 LCNL1 C9orf172
nsv1161918 Chr.9:137118319 - 137438026 on Build GRCh38 Duplication ANAPC2 NELFB NOXA1 TMEM210 RNF208 STPG3 CYSRT1 C9orf173-AS1 TMEM203 NRARP EXD3 TOR4A TPRN TUBB4B NDOR1 RNF224 ENTPD8 GRIN1 MIR3621 SLC34A3 SSNA1 LRRC26 FAM166A
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss LOC101930307 C9orf139 TMEM210 SAPCD2 NPDC1 MAN1B1-AS1 MAN1B1 ENTPD2 GRIN1 MIR3621 UAP1L1 LRRC26 DPP7
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain ANAPC2 LOC101930307 C9orf139 TMEM210 SAPCD2 FUT7 NPDC1 MAN1B1-AS1 MAN1B1 ENTPD2 GRIN1 MIR3621 SSNA1 UAP1L1 LRRC26 DPP7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion ANAPC2 LOC101930307 RNF208 FUT7 MIR126 NRARP LOC100128593 MAN1B1-AS1 EDF1 MAN1B1 RNF224 HSPC324 ENTPD2 SSNA1 FAM69B UAP1L1 DPP7 NELFB FBXW5 TMEM210 SNORA17B C9orf142 SNHG7 LCN10 CCDC183 EXD3 TOR4A ABCA2 NDOR1 CLIC3 C8G GRIN1 MIR3621 LINC01451 LRRC26 FAM166A LCN15 C9orf139 RABL6 STPG3 CYSRT1 MIR4479 C9orf173-AS1 TMEM203 PHPT1 MIR6722 CCDC183-AS1 LCN8 TRAF2 MAMDC4 LCN12 TUBB4B PRR31 SNORA17A TMEM141 SLC34A3 PTGDS SAPCD2 AGPAT2 NPDC1 EGFL7 MIR4292 LCN6 TPRN LCNL1 C9orf172

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

transmembrane signal receptor

Gene Ontology Categories:

Function(s) Process(es)


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