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Gene Symbol
NME4
Assay Reference Genome
Location

Chr.16:400355 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01256724_cn
Size
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Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 4833

Gene Name:

 NME/NM23 nucleoside diphosphate kinase 4

Gene Aliases:

 NDPK-D, NM23H4, nm23-H4

Location:

 Chr.16:396755-400754 on Build GRCh38

Assay Gene Location:

 Within Exon 8
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NME4 NM_001286433.1 4 506 NP_001273362.1
NM_001286435.1 5 718 NP_001273364.1
NM_001286436.1 5 811 NP_001273365.1
NM_001286438.1 6 786 NP_001273367.1
NM_001286439.1 6 795 NP_001273368.1
NM_001286440.1 5 924 NP_001273369.1
NM_005009.2 5 608 NP_005000.1
AF086133.1 3 306
AK094439.1 2 1467
BC004880.2 5 591 AAH04880.1
BC017067.1 5 608 AAH17067.1
BE266496.1
BQ650649.1 5 767
BQ932845.1 5 862
BT019438.1 AAV38245.1
CF126980.1
HY182358.1
Y07604.1 5 588 CAA68877.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication WDR90 NUBP2 RAB40C HAGH CACNA1H KCTD5 LOC105371047 MIR3178 LOC100287175 HBA2 LOC100134368 STUB1 LOC101929280 RAB11FIP3 PKD1 RNF151 LINC00254 LUC7L CHTF18 TBC1D24 SLC9A3R2 BAIAP3 CEMP1 HBM ABCA17P CCNF LOC107987233 FBXL16 C16orf59 NTN3 DDX11L10 TPSG1 ATP6V0C MIR6767 GFER FLJ42627 NME3 RGS11 NHLRC4 NTHL1 LOC105371049 ERVK13-1 ARHGDIG MRPL28 HAGHL PRSS27 TMEM204 NPRL3 CLCN7 WDR24 LOC106660606 MSLN LOC652276 SSTR5 JMJD8 SPSB3 E4F1 RPS2 AMDHD2 HBA1 MCRIP2 AXIN1 NOXO1 TPSB2 LMF1 TPSAB1 HBZ PTX4 NPW CCDC154 ABCA3 MIR4516 PIGQ GNPTG PRR25 RNPS1 CCDC78 HBQ1 MIR6511B1 CAPN15 METRN MRPS34 IFT140 RPUSD1 MPG CASKIN1 UBE2I SNORA10 WFIKKN1 RHOT2 LOC107984876 ZNF598 UNKL MLST8 FAHD1 LINC00235 LOC729652 RAB26 DECR2 WASIR2 SNORA78 NARFL HS3ST6 GNG13 FAM234A TSR3 SNHG9 RPL3L SNORD60 PRR35 BRICD5 METTL26 MIR5587 CRAMP1 POLR3K DNASE1L2 IGFALS PDPK1 NME4 SYNGR3 MIR3176 PDIA2 MIR3677 LOC105371184 LOC105371046 MIR1225 TMEM8A TPSD1 LOC105371045 MIR3180-5 SSTR5-AS1 C16orf91 SNORA64 SNRNP25 RHBDL1 RPL23AP5 SNHG19 HN1L MIR6768 MIR940 C1QTNF8 MIR662 PRSS29P RHBDF1 LMF1-AS1 MEIOB TSC2 NDUFB10 MIR3177 TELO2 TRAF7 TBL3 ECI1 MIR6859-4 FAM173A MAPK8IP3 LOC105371038 SOX8 PGP MIR4717 EME2 MSRB1
dgv4810n54 Chr.16:380011 - 445662 on Build GRCh38 Loss LOC100134368 RPL23AP5 RAB11FIP3 NME4 DECR2 TMEM8A
esv3637563 Chr.16:263248 - 505590 on Build GRCh38 Gain LOC100134368 RGS11 AXIN1 RPL23AP5 RAB11FIP3 NME4 DECR2 PDIA2 TMEM8A ARHGDIG MRPL28 FAM234A
nsv570956 Chr.16:376432 - 437728 on Build GRCh38 Gain LOC100134368 RPL23AP5 RAB11FIP3 NME4 DECR2 TMEM8A
nsv570954 Chr.16:342461 - 530124 on Build GRCh38 Loss LOC100134368 AXIN1 CAPN15 RPL23AP5 RAB11FIP3 NME4 DECR2 TMEM8A MRPL28 LINC00235
nsv457303 Chr.16:383623 - 445662 on Build GRCh38 Loss LOC100134368 RPL23AP5 RAB11FIP3 NME4 DECR2
dgv4809n54 Chr.16:322597 - 451362 on Build GRCh38 Loss LOC100134368 AXIN1 RPL23AP5 RAB11FIP3 NME4 DECR2 TMEM8A MRPL28
dgv32n68 Chr.16:245507 - 476226 on Build GRCh38 Loss LOC100134368 RGS11 AXIN1 RPL23AP5 RAB11FIP3 NME4 DECR2 PDIA2 TMEM8A ARHGDIG MRPL28 FAM234A

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More Information


Additional Information:

For this assay, SNP(s) [rs113276552] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

kinase

Gene Ontology Categories:

Function(s) Process(es)


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