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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49708727 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01264780_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 16 - Exon 17
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 BAD92121.1
AF357970.1 AAL99615.1
AK074389.1 BAB85068.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
AL831876.1 CAD38561.2
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss PRR12 IRF3 CPT1C NOSIP ADM5 RRAS MIR5088 PRMT1 SCAF1 BCL2L12 PRRG2
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss PRR12 IRF3 CPT1C NOSIP ADM5 RRAS MIR5088 PRMT1 SCAF1 BCL2L12 PRRG2
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SNAR-C2 SNAR-A12 FGF21 GRIN2D MIR6799 PLEKHA4 CABP5 SNORD34 MIR4751 SNAR-C5 VRK3 FLJ26850 HSD17B14 EMP3 NTN5 MIR4750 MIR5088 LOC100287477 SNAR-B1 SNAR-A8 CPT1C FLT3LG RPL18 PTOV1-AS1 PLA2G4C LOC101928295 LMTK3 BSPH1 SIGLEC16 PPP1R15A C19orf68 FUT2 SNAR-A5 AKT1S1 NTF4 PTOV1-AS2 SNAR-A1 FCGRT RPS11 SNAR-C4 CCDC155 ATF5 RUVBL2 CGB2 LHB DKKL1 DBP TEAD2 PPFIA3 IRF3 SNAR-A10 FUZ SNAR-A3 RPL13A MIR6798 TBC1D17 SNORD35B KCNA7 KCNJ14 CD37 RRAS FTL SNAR-C3 MIR4324 TULP2 PNKP TRPM4 SNORD35A PRRG2 FAM83E CGB1 NUP62 RASIP1 LOC105372430 CGB5 SCAF1 MIR150 ZNF114 SNRNP70 SNAR-A11 IZUMO1 SULT2B1 C19orf73 CA11 ADM5 SNORD32A GFY DHDH MAMSTR LOC101059948 GRWD1 SNAR-C1 SNAR-D CGB3 BCAT2 LOC105447645 SNAR-B2 IL4I1 ALDH16A1 PRR12 BAX SLC17A7 TSKS SNAR-A14 SNAR-G2 CCDC114 SYNGR4 FUT1 SNAR-A6 BCL2L12 LIN7B KDELR1 ZNF473 PTOV1 SNAR-A4 PLA2G4C-AS1 SPHK2 SNORD33 SLC6A16 SPACA4 AP2A1 SNAR-A9 RCN3 PIH1D1 CARD8-AS1 ELSPBP1 GYS1 CYTH2 LIG1 CGB7 NOSIP SNAR-A7 MIR6800 SNAR-G1 TMEM143 PRMT1 HRC SEC1P MIR4749 CARD8 SNAR-A2 NUCB1 PTH2 SIGLEC11 MED25 SNAR-A13 NUCB1-AS1 CGB8
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain PRR12 IRF3 CPT1C ADM5 RRAS MIR5088 PRMT1 SCAF1 BCL2L12
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion MIR6799 PTOV1 ATF5 MIR4751 IRF3 FUZ ADM5 AP2A1 MIR4750 MIR5088 CPT1C TBC1D17 NOSIP MIR6800 RRAS PRMT1 PTOV1-AS1 MIR4749 IL4I1 PNKP PRRG2 PRR12 NUP62 TSKS AKT1S1 SCAF1 PTOV1-AS2 MED25 BCL2L12
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain PRR12 IRF3 CPT1C NOSIP ADM5 RRAS MIR5088 PRMT1 SCAF1 BCL2L12 PRRG2
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion MIR150 RPS11 MIR6799 SNORD34 SNORD33 IRF3 FUZ ADM5 SNORD32A AP2A1 MIR5088 RCN3 RPL13A CPT1C SNORD35B NOSIP MIR6800 RRAS PRMT1 PTOV1-AS1 SNORD35A PRRG2 PRR12 TSKS SCAF1 MED25 BCL2L12 FCGRT

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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