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See other STUB1 CNV Assays ›
Gene Symbol
STUB1
Assay Reference Genome
Location

Chr.16:681596 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01271249_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10273

Gene Name:

 STIP1 homology and U-box containing protein 1

Gene Aliases:

 CHIP, HSPABP2, NY-CO-7, SCAR16, SDCCAG7, UBOX1

Location:

 Chr.16:680111-682768 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 3 - Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
STUB1 NM_001293197.1 NP_001280126.1
NM_005861.3 NP_005852.2
AF039689.1 AAC18038.1
AF129085.1 AAD33400.1
AF217968.1 AAG17211.1
AF432221.1 AAL99927.1
BC007545.1 AAH07545.1
BC017178.1 AAH17178.1
BC022788.1 AAH22788.1
BC063617.1 AAH63617.1
CB145452.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv827480 Chr.16:672775 - 685288 on Build GRCh38 Gain RHOT2 JMJD8 RHBDL1 STUB1 LOC105371184 WDR24
nsv482181 Chr.16:680115 - 682767 on Build GRCh38 Gain JMJD8 STUB1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication RPL3L MIR6768 PDPK1 E4F1 MLST8 LINC00235 POLR3K LOC105371046 MIR6767 MIR6511B1 PTX4 NHLRC4 RNF151 BRICD5 TSR3 SYNGR3 KCTD5 PDIA2 TSC2 MSLN AMDHD2 HBA2 PRSS29P FAM234A ARHGDIG HBZ UBE2I HBQ1 PRR25 WASIR2 TPSD1 TMEM204 C16orf59 MIR662 FLJ42627 SNORD60 NDUFB10 MRPL28 RHBDF1 HBA1 DECR2 MSRB1 RHBDL1 UNKL DDX11L10 PIGQ WDR90 SLC9A3R2 TELO2 MIR6859-4 LOC105371038 ERVK13-1 NUBP2 SSTR5-AS1 IFT140 MAPK8IP3 LOC100134368 FAHD1 PRSS27 RPS2 MIR940 CAPN15 CASKIN1 PKD1 WFIKKN1 METTL26 RPUSD1 SNHG19 NPRL3 GNPTG C16orf91 METRN GFER LMF1 NARFL MIR4717 ABCA3 LOC107984876 LOC101929280 RNPS1 MPG MIR4516 C1QTNF8 NME4 NOXO1 RHOT2 ECI1 ATP6V0C HN1L MIR3180-5 JMJD8 LOC106660606 SPSB3 LOC105371184 RAB11FIP3 MIR3176 RAB26 MIR5587 ABCA17P RGS11 AXIN1 BAIAP3 LOC105371049 CCDC78 FAM173A HBM LOC105371047 NTN3 TPSG1 MIR3177 EME2 CRAMP1 LOC729652 CLCN7 CCDC154 LINC00254 TPSB2 LOC107987233 CHTF18 MIR3677 PRR35 SNORA10 LOC652276 SNRNP25 RAB40C NPW SNORA78 SOX8 MIR3178 HS3ST6 ZNF598 SSTR5 GNG13 DNASE1L2 LOC100287175 MRPS34 TBL3 MCRIP2 TMEM8A HAGH CACNA1H PGP TPSAB1 RPL23AP5 STUB1 NME3 MIR1225 WDR24 SNHG9 TBC1D24 LMF1-AS1 NTHL1 LOC105371045 CEMP1 CCNF TRAF7 SNORA64 FBXL16 IGFALS LUC7L MEIOB HAGHL
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss LINC00235 RAB40C RHBDL1 NHLRC4 PIGQ WDR90 RHOT2 LOC105371038 JMJD8 GNG13 MSLN LOC100287175 LOC105371184 RAB11FIP3 MIR3176 MCRIP2 MIR5587 CCDC78 CAPN15 WFIKKN1 METTL26 FAM173A RPUSD1 STUB1 WDR24 PRR25 METRN LOC107987233 NARFL MIR662 FBXL16 CHTF18 LOC101929280 PRR35 HAGHL
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss LINC00235 RAB40C RHBDL1 NHLRC4 PIGQ WDR90 RHOT2 LOC105371038 JMJD8 GNG13 MSLN LOC100287175 LOC105371184 RAB11FIP3 MIR3176 MCRIP2 MIR5587 CCDC78 CAPN15 WFIKKN1 METTL26 FAM173A RPUSD1 STUB1 WDR24 PRR25 METRN LOC107987233 NARFL MIR662 FBXL16 CHTF18 LOC101929280 PRR35 HAGHL
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion C1QTNF8 LINC00235 RAB40C RHBDL1 NHLRC4 PIGQ WDR90 RHOT2 LOC105371038 SOX8 SSTR5 JMJD8 GNG13 MSLN SSTR5-AS1 LOC100287175 LOC105371184 RAB11FIP3 MIR3176 MCRIP2 MIR5587 CCDC78 CAPN15 WFIKKN1 METTL26 FAM173A RPUSD1 STUB1 WDR24 PRR25 LMF1-AS1 METRN LOC107987233 LMF1 NARFL MIR662 FBXL16 CHTF18 LOC107984876 LOC101929280 PRR35 HAGHL
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss CCDC78 WFIKKN1 METTL26 FAM173A RAB40C RHBDL1 STUB1 PIGQ WDR90 WDR24 RHOT2 LOC105371038 METRN JMJD8 NARFL FBXL16 LOC101929280 LOC100287175 LOC105371184 HAGHL MCRIP2
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RAB40C RHBDL1 PIGQ WDR90 RHOT2 LOC105371038 JMJD8 GNG13 MSLN LOC100287175 LOC105371184 MCRIP2 CCDC78 WFIKKN1 METTL26 FAM173A RPUSD1 STUB1 WDR24 METRN NARFL MIR662 FBXL16 CHTF18 LOC101929280 HAGHL
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication LINC00235 RAB40C RHBDL1 NHLRC4 PIGQ WDR90 RHOT2 LOC105371038 JMJD8 GNG13 MSLN LOC100287175 LOC105371184 RAB11FIP3 MIR3176 MCRIP2 MIR5587 CCDC78 CAPN15 WFIKKN1 METTL26 FAM173A RPUSD1 STUB1 WDR24 PRR25 METRN LOC107987233 NARFL MIR662 FBXL16 CHTF18 LOC101929280 PRR35 HAGHL
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss CCDC78 WFIKKN1 METTL26 FAM173A RAB40C RHBDL1 STUB1 WDR90 WDR24 RHOT2 LOC105371038 METRN JMJD8 NARFL FBXL16 LOC100287175 LOC105371184 HAGHL MCRIP2
nsv457310 Chr.16:651656 - 681725 on Build GRCh38 Loss RHOT2 JMJD8 RHBDL1 STUB1 LOC105371184 WDR90
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain CCDC78 WFIKKN1 METTL26 FAM173A RHBDL1 STUB1 WDR90 WDR24 RHOT2 LOC105371038 METRN JMJD8 NARFL FBXL16 LOC100287175 LOC105371184 HAGHL MCRIP2
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss CCDC78 FAM173A RHBDL1 STUB1 WDR90 WDR24 RHOT2 METRN JMJD8 NARFL MSLN FBXL16 LOC105371184 HAGHL
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss CCDC78 FAM173A RPUSD1 RHBDL1 STUB1 WDR90 WDR24 RHOT2 LOC105371038 METRN JMJD8 GNG13 NARFL MSLN MIR662 FBXL16 CHTF18 LOC100287175 LOC105371184 HAGHL MCRIP2

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)


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