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See other B4GALNT4 CNV Assays ›
Gene Symbol
B4GALNT4
Assay Reference Genome
Location

Chr.11:381708 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01286339_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 338707

Gene Name:

 beta-1,4-N-acetyl-galactosaminyltransferase 4

Gene Aliases:

 -

Location:

 Chr.11:369773-382117 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 20 - Exon 21
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
B4GALNT4 NM_178537.4 NP_848632.2
XM_017017654.1 XP_016873143.1
AB089939.1 BAD06471.1
AK057774.1 BAB71566.1
BC131528.1
CN348077.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv527327 Chr.11:295343 - 620599 on Build GRCh38 Loss RASSF7 LOC101059906 PKP3 MIR210HG PGGHG SIGIRR IFITM3 RNH1 LOC143666 IFITM1 ANO9 HRAS LRRC56 MIR210 IFITM5 CDHR5 IRF7 PTDSS2 PHRF1 LMNTD2 B4GALNT4 IFITM2
nsv469923 Chr.11:378188 - 1302334 on Build GRCh38 Loss PDDC1 LOC101059906 MIR210HG SIGIRR RNH1 EPS8L2 POLR2L ANO9 SNORA52 PNPLA2 CRACR2B TALDO1 LRRC56 MIR210 RPLP2 CDHR5 IRF7 LMNTD2 MIR6744 B4GALNT4 PIDD1 DEAF1 PANO1 AP2A2 CEND1 TSPAN4 LOC101927503 TOLLIP RASSF7 PKP3 MUC2 SLC25A22 DRD4 CD151 LOC143666 MUC6 HRAS TMEM80 CHID1 MUC5B LOC171391 SCT PTDSS2 PHRF1 MUC5AC
nsv552776 Chr.11:366710 - 432436 on Build GRCh38 Loss PKP3 SIGIRR B4GALNT4 ANO9
esv28392 Chr.11:363975 - 403432 on Build GRCh38 Gain+Loss PKP3 B4GALNT4
nsv951268 Chr.11:368601 - 503700 on Build GRCh38 Deletion PKP3 SIGIRR RNH1 PTDSS2 B4GALNT4 ANO9
nsv552770 Chr.11:356090 - 444628 on Build GRCh38 Gain PKP3 SIGIRR B4GALNT4 ANO9
dgv1505n54 Chr.11:198510 - 470331 on Build GRCh38 Gain PKP3 PGGHG SIGIRR IFITM3 ODF3 IFITM1 ANO9 SIRT3 NLRP6 BET1L MIR6743 IFITM5 RIC8A PTDSS2 PSMD13 B4GALNT4 IFITM2
nsv1159790 Chr.11:340219 - 491334 on Build GRCh38 Deletion PKP3 SIGIRR PTDSS2 B4GALNT4 ANO9
dgv182e199 Chr.11:349830 - 943372 on Build GRCh38 Deletion PDDC1 LOC101059906 MIR210HG SIGIRR RNH1 EPS8L2 POLR2L ANO9 SNORA52 PNPLA2 CRACR2B TALDO1 LRRC56 MIR210 RPLP2 CDHR5 IRF7 LMNTD2 B4GALNT4 PIDD1 DEAF1 PANO1 AP2A2 CEND1 TSPAN4 RASSF7 PKP3 SLC25A22 DRD4 CD151 LOC143666 HRAS TMEM80 CHID1 LOC171391 SCT PTDSS2 PHRF1
dgv1507n54 Chr.11:368778 - 382912 on Build GRCh38 Loss B4GALNT4

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Process(es)


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