Hs01291770_cn

• Gene Symbol: SLC51A
• Assay Reference Genome Location: Chr.3:196217865 on build GRCh38
• Cytoband: 3q29

Target Gene Details

• Entrez Gene ID: 200931
• Gene Name: solute carrier family 51 alpha subunit
• Gene Aliases: OSTA, OSTalpha
• Location: Chr.3:196216512-196233430 on Build GRCh38
• Assay Gene Location: Overlaps Intron 1 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC51A	NM_152672.5			NP_689885.4
	AK172837.1			BAD18802.1
	AK300996.1
	AY194243.1			AAP23993.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv997797	Chr.3:195931489 - 196486087 on Build GRCh38	Gain	LINC00885 UBXN7 ZDHHC19 SDHAP1 RNF168 TM4SF19-AS1 TCTEX1D2 SLC51A TFRC PCYT1A TM4SF19-TCTEX1D2 TM4SF19 LOC105374301 UBXN7-AS1
esv3569221	Chr.3:196209781 - 196229993 on Build GRCh38	Loss	SLC51A ZDHHC19
nsv1009811	Chr.3:196124925 - 196411200 on Build GRCh38	Gain	TCTEX1D2 SLC51A LINC00885 PCYT1A UBXN7 TM4SF19-TCTEX1D2 ZDHHC19 TM4SF19 TM4SF19-AS1
nsv593071	Chr.3:196132016 - 196345571 on Build GRCh38	Gain	TCTEX1D2 SLC51A LINC00885 PCYT1A TM4SF19-TCTEX1D2 ZDHHC19 TM4SF19 TM4SF19-AS1
nsv1008512	Chr.3:195982791 - 196248065 on Build GRCh38	Gain	SLC51A LINC00885 TFRC PCYT1A ZDHHC19 LOC105374301 SDHAP1
esv2759213	Chr.3:195382058 - 196344722 on Build GRCh38	Gain+Loss	SDHAP2 LINC00885 LOC105374297 MUC20 APOD ZDHHC19 LINC00969 PPP1R2 SDHAP1 TM4SF19-AS1 MIR570 TCTEX1D2 SLC51A MUC4 TFRC PCYT1A LOC105374299 TM4SF19-TCTEX1D2 LOC101929697 TM4SF19 LOC105374301 MIR6829 TNK2 ACAP2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transporter

Gene Ontology Categories:

Process(es)

transport
bile acid and bile salt transport

Function(s)

transporter activity
protein homodimerization activity
protein heterodimerization activity