Hs01302557_cn

• Gene Symbol: LOC101927911
• Assay Reference Genome Location: Chr.17:2963868 on build GRCh38
• Cytoband: 17p13.3

Target Gene Details

• Entrez Gene ID: 101927911
• Gene Name: uncharacterized LOC101927911
• Gene Aliases: -
• Location: Chr.17:2962247-2965895 on Build GRCh38
• Assay Gene Location: Overlaps Intron 2 - Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101927911	NR_110818.1

Target Gene Details

• Entrez Gene ID: 23108
• Gene Name: RAP1 GTPase activating protein 2
• Gene Aliases: GARNL4, RAP1GA3
• Location: Chr.17:2755698-3037741 on Build GRCh38
• Assay Gene Location: Overlaps Intron 15 - Exon 16

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
RAP1GAP2	NM_001100398.1			NP_001093868.1
	NM_015085.4			NP_055900.4
	XM_005256542.2			XP_005256599.1
	XM_006721477.3			XP_006721540.1
	XM_011523738.1			XP_011522040.1
	XM_011523739.1			XP_011522041.1
	XM_011523740.2			XP_011522042.1
	XM_011523741.2			XP_011522043.1
	XM_011523742.2			XP_011522044.1
	XM_011523743.2			XP_011522045.1
	XM_017024370.1			XP_016879859.1
	XM_017024371.1			XP_016879860.1
	AJ628446.1			CAF31652.1
	AJ628447.1			CAF31653.1
	AK124640.1			BAC85912.1
	BC140870.1
	BC140871.1
	CR627427.1			CAH10514.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv1065489	Chr.17:2631416 - 3948349 on Build GRCh38	Gain	LOC105371592 CLUH LOC105371591 GSG2 OR3A3 PAFAH1B1 OR3A1 OR1D2 NCBP3 OR3A4P RAP1GAP2 OR1A1 CCDC92B P2RX5 P2RX5-TAX1BP3 OR3A2 OR1A2 P2RX1 LOC101927911 TRPV3 OR1D4 TRPV1 ASPA CAMKK1 OR1E2 OR1E1 ATP2A3 EMC6 MIR6776 MIR1253 OR1G1 SHPK ITGAE CTNS TAX1BP3 SPATA22 OR1D5
esv2660206	Chr.17:2679367 - 3519614 on Build GRCh38	Deletion	LOC105371592 CLUH OR3A2 OR1A2 LOC105371591 LOC101927911 TRPV3 OR1D4 OR3A3 ASPA PAFAH1B1 OR3A1 OR1D2 OR1E2 OR1E1 MIR6776 MIR1253 OR3A4P RAP1GAP2 OR1G1 OR1A1 CCDC92B SPATA22 OR1D5
nsv574227	Chr.17:2924664 - 3036687 on Build GRCh38	Loss	LOC101927911 RAP1GAP2

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

GTPase-activating protein

Gene Ontology Categories:

Process(es)

regulation of cell size
negative regulation of neuron projection development
positive regulation of GTPase activity
regulation of small GTPase mediated signal transduction

Function(s)

GTPase activator activity
protein binding