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See other TNNT3 CNV Assays ›
Gene Symbol
TNNT3
Assay Reference Genome
Location

Chr.11:1925268 on build GRCh38
Cytoband
11p15.5
Assay ID Hs01318380_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 7140

Gene Name:

 troponin T3, fast skeletal type

Gene Aliases:

 TNTF

Location:

 Chr.11:1919551-1938706 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Intron 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TNNT3 NM_001042780.2 NP_001036245.1
NM_001042781.2 NP_001036246.1
NM_001042782.2 NP_001036247.1
NM_001297646.1 NP_001284575.1
NM_006757.3 NP_006748.1
XM_006718290.3 XP_006718353.1
XM_006718293.2 XP_006718356.1
XM_006718294.3 XP_006718357.1
XM_006718296.3 XP_006718359.1
XM_006718299.2 XP_006718362.1
XM_006718300.3 XP_006718363.1
XM_006718302.3 XP_006718365.1
XM_011520343.2 XP_011518645.1
XM_017018205.1 XP_016873694.1
XM_017018206.1 XP_016873695.1
XM_017018207.1 XP_016873696.1
XM_017018208.1 XP_016873697.1
XM_017018209.1 XP_016873698.1
XM_017018210.1 XP_016873699.1
XM_017018211.1 XP_016873700.1
XM_017018212.1 XP_016873701.1
XM_017018213.1 XP_016873702.1
XM_017018214.1 XP_016873703.1
XM_017018215.1 XP_016873704.1
XM_017018216.1 XP_016873705.1
XM_017018217.1 XP_016873706.1
XM_017018218.1 XP_016873707.1
XM_017018219.1 XP_016873708.1
AK056968.1
BC050446.1 AAH50446.1
BC062430.1 AAH62430.1
BC117327.1
BC143537.1
BC171727.1
BT019997.1 AAV38800.1
BX640689.1 CAE45814.1
CR541927.1 CAG46725.1
DA897990.1
DA899275.1
DQ778624.1
M21984.1 AAA36777.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv522320 Chr.11:1835882 - 1996938 on Build GRCh38 Loss TNNI2 HOTS MRPL23 TNNT3 LINC01150 MRPL23-AS1 MIR7847 SNORD131 MIR4298 SYT8 LSP1 MIR675 H19 LINC01219
nsv1047474 Chr.11:1803515 - 2043381 on Build GRCh38 Gain TNNI2 HOTS MRPL23 TNNT3 LINC01150 MRPL23-AS1 MIR7847 SNORD131 MIR4298 SYT8 LSP1 MIR675 H19 LINC01219
nsv1039289 Chr.11:1883459 - 1939958 on Build GRCh38 Gain TNNT3 LSP1 LINC01150
nsv469926 Chr.11:1813024 - 2036416 on Build GRCh38 Loss TNNI2 HOTS MRPL23 TNNT3 LINC01150 MRPL23-AS1 MIR7847 SNORD131 MIR4298 SYT8 LSP1 MIR675 H19 LINC01219
dgv132e201 Chr.11:1894328 - 1939803 on Build GRCh38 Deletion TNNT3 LINC01150
nsv7643 Chr.11:1867726 - 1927695 on Build GRCh38 Deletion MIR7847 TNNT3 LSP1 LINC01150
nsv951283 Chr.11:1913571 - 2040070 on Build GRCh38 Deletion MRPL23-AS1 SNORD131 HOTS MRPL23 TNNT3 MIR675 H19 LINC01219
esv29980 Chr.11:1820597 - 2097889 on Build GRCh38 Loss TNNI2 HOTS MRPL23 TNNT3 LINC01150 MRPL23-AS1 MIR7847 SNORD131 MIR4298 SYT8 LSP1 MIR675 H19 LINC01219
nsv553047 Chr.11:1733170 - 2418537 on Build GRCh38 Gain IGF2-AS TNNI2 CD81 C11orf21 ASCL2 INS TNNT3 TSPAN32 IFITM10 TSSC4 MIR7847 SNORD131 MIR4298 IGF2 CD81-AS1 LSP1 MIR675 TH CTSD INS-IGF2 HOTS MIR483 MRPL23 LINC01150 MIR4686 MRPL23-AS1 TRPM5 SYT8 H19 LINC01219

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More Information


Additional Information:

For this assay, SNP(s) [rs73413020] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

actin binding motor protein

Gene Ontology Categories:

Function(s) Process(es)


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