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See other AFG3L1P CNV Assays ›
Gene Symbol
AFG3L1P
Assay Reference Genome
Location

Chr.16:89981866 on build GRCh38
Cytoband
16q24.3
Assay ID Hs01318769_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 172

Gene Name:

 AFG3 like matrix AAA peptidase subunit 1, pseudogene

Gene Aliases:

 AFG3, AFG3L1

Location:

 Chr.16:89972580-90000787 on Build GRCh38

Assay Gene Location:

 Within Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
AFG3L1P NR_003226.1 5 642
NR_003227.1 5 569
NR_003228.1 5 608
AF329691.1 4 393
AF329693.1 4 393
AF329694.1 3 324
AK056488.1 5 595
AK091293.1 5 605
AK097044.1 5 556 BAC04933.1
AK126911.1 4 533
AK128804.1 2 186

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv573842 Chr.16:89964848 - 90038925 on Build GRCh38 Loss AFG3L1P GAS8 DEF8 GAS8-AS1 CENPBD1 DBNDD1
esv3639603 Chr.16:89944533 - 90039438 on Build GRCh38 Gain AFG3L1P GAS8 DEF8 GAS8-AS1 CENPBD1 DBNDD1
nsv471120 Chr.16:89977620 - 90063728 on Build GRCh38 Gain AFG3L1P URAHP GAS8 GAS8-AS1 PRDM7 DBNDD1
esv2762221 Chr.16:89610380 - 90039318 on Build GRCh38 Gain+Loss VPS9D1 SPATA2L CDK10 GAS8 VPS9D1-AS1 LOC107984817 CENPBD1 CHMP1A DBNDD1 SPATA33 AFG3L1P LOC105371419 ZNF276 TUBB3 MC1R DPEP1 DEF8 GAS8-AS1 TCF25 SPIRE2 FANCA
nsv573810 Chr.16:89857498 - 90037251 on Build GRCh38 Loss AFG3L1P TUBB3 MC1R GAS8 DEF8 GAS8-AS1 TCF25 CENPBD1 SPIRE2 DBNDD1
nsv428331 Chr.16:89216635 - 90185980 on Build GRCh38 Gain+Loss CDK10 GAS8 ZNF778 LOC107984817 LOC105371414 LOC100287036 CHMP1A RPL13 DBNDD1 LOC105371419 URAHP ZNF276 DPEP1 DEF8 CPNE7 GAS8-AS1 FAM157C TUBB8P7 PRDM7 FANCA VPS9D1 SPATA2L VPS9D1-AS1 SPG7 CENPBD1 SNORD68 SPATA33 AFG3L1P TUBB3 MC1R TCF25 LOC101927817 ANKRD11 SPIRE2
nsv573799 Chr.16:89852186 - 90022379 on Build GRCh38 Gain AFG3L1P LOC105371419 TUBB3 MC1R GAS8 DEF8 TCF25 CENPBD1 SPIRE2 DBNDD1
esv3892941 Chr.16:89941888 - 90002650 on Build GRCh38 Gain AFG3L1P DEF8 CENPBD1
nsv471119 Chr.16:89957794 - 90083514 on Build GRCh38 Loss AFG3L1P URAHP GAS8 DEF8 GAS8-AS1 CENPBD1 PRDM7 DBNDD1
nsv1066499 Chr.16:89891957 - 90028891 on Build GRCh38 Loss AFG3L1P TUBB3 MC1R GAS8 DEF8 TCF25 CENPBD1 DBNDD1
nsv482951 Chr.16:88633593 - 90228345 on Build GRCh38 Loss GALNS LOC105371409 ZNF778 LOC107984817 LOC105371414 LOC339059 PIEZO1 ACSF3 SLC22A31 LOC105371419 DPEP1 DEF8 CPNE7 LOC100129697 FANCA CBFA2T3 SPATA2L IL17C VPS9D1-AS1 SNAI3-AS1 LOC101927793 MC1R SNAI3 LOC101927817 LINC00304 APRT LOC107987238 RNF166 CDK10 GAS8 LOC100287036 CHMP1A RPL13 CYBA DBNDD1 LOC100289580 URAHP ZNF276 GAS8-AS1 FAM157C TUBB8P7 CDT1 PRDM7 MVD VPS9D1 TRAPPC2L PABPN1L SPG7 CDH15 CENPBD1 SNORD68 SPATA33 MIR4722 AFG3L1P TUBB3 CTU2 TCF25 LOC400558 ANKRD11 SPIRE2

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

metalloprotease

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