Genomic Map
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Target Gene Details
Entrez Gene ID: | 57190 |
Gene Name: | selenoprotein N, 1 |
Gene Aliases: |
CFTD, MDRS1, RSMD1, RSS, SELN |
Location: |
Chr.1:25800176-25818222 on Build GRCh38 |
Assay Gene Location: | Within Exon 13 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SEPN1 | NM_020451.2 | 13 | 3094 | NP_065184.2 |
| NM_206926.1 | 12 | 2992 | NP_996809.1 | |
| AF166125.1 | 11 | 2683 | AAF21430.1 | |
| AJ306399.1 | 13 | 3094 | CAC83791.1 | |
| AK172860.1 | 1 | 1411 | ||
| AL110205.1 | 1 | 833 | ||
| BC015638.2 | 4 | 1759 | AAH15638.1 | |
| BC042154.2 | 4 | 1759 | AAH42154.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv7490 | Chr.1:25797857 - 25843537 on Build GRCh38 | Deletion |
 LOC646471
MTFR1L
AUNIP
SEPN1
|
| nsv460884 | Chr.1:25778482 - 25891593 on Build GRCh38 | Loss |
LOC646471
PAQR7
MAN1C1
STMN1
MTFR1L
AUNIP
SEPN1
|
| nsv834491 | Chr.1:25726411 - 25914117 on Build GRCh38 | Loss |
LOC646471
PAQR7
MIR3917
MAN1C1
STMN1
MTFR1L
AUNIP
SEPN1
|
| nsv950337 | Chr.1:25800110 - 25819709 on Build GRCh38 | Deletion |
SEPN1
|
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Additional Information:
For this assay, SNP(s) [rs117198314] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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