Hs01347677_cn

• Gene Symbol: GGA1
• Assay Reference Genome Location: Chr.22:37608627 on build GRCh38
• Cytoband: 22q13.1

Target Gene Details

• Entrez Gene ID: 26088
• Gene Name: golgi associated, gamma adaptin ear containing, ARF binding protein 1
• Gene Aliases: -
• Location: Chr.22:37607235-37633564 on Build GRCh38
• Assay Gene Location: Within Exon 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GGA1	NM_001001560.2	1	154	NP_001001560.1
	NM_001172687.1	1	154	NP_001166158.1
	NM_013365.4	1	154	NP_037497.1
	XM_005261517.3	2	328	XP_005261574.1
	XM_011530122.1	2	261	XP_011528424.1
	XM_011530124.1	2	328	XP_011528426.1
	XM_017028760.1	2	328	XP_016884249.1
	XM_017028762.1	2	328	XP_016884251.1
	AK075256.1	1	132	BAC11501.1
	DA455573.1	1	154

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv829203	Chr.22:36998126 - 37773322 on Build GRCh38	Loss	CYTH4 CARD10 GGA1 SSTR3 IL2RB TRIOBP NOL12 TST TMPRSS6 CDC42EP1 LOC101927051 LOC100506271 C1QTNF6 SH3BP1 MPST TEX33 LGALS2 KCTD17 LGALS1 ELFN2 LOC102724378 PDXP RAC2 MFNG
esv2758838	Chr.22:37607870 - 37869871 on Build GRCh38	Loss	MIR658 GGA1 TRIOBP NOL12 GCAT LOC101927051 MIR659 GALR3 ANKRD54 SH3BP1 LGALS1 LOC102724378 PDXP EIF3L H1F0
nsv471197	Chr.22:37600773 - 37762734 on Build GRCh38	Loss	LOC101927051 SH3BP1 GGA1 TRIOBP NOL12 LGALS1 LOC102724378 PDXP
nsv834191	Chr.22:37533773 - 37717344 on Build GRCh38	Loss	LOC101927051 SH3BP1 GGA1 LGALS2 TRIOBP NOL12 LGALS1 PDXP CDC42EP1
nsv1057617	Chr.22:37462633 - 37713698 on Build GRCh38	Gain	LOC101927051 CARD10 SH3BP1 GGA1 LGALS2 TRIOBP NOL12 LGALS1 PDXP MFNG CDC42EP1

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

intracellular protein transport
vesicle-mediated transport
cellular protein metabolic process
positive regulation of protein catabolic process
toxin transport

Function(s)

molecular_function
protein binding