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See other BSG CNV Assays ›
Gene Symbol
BSG
Assay Reference Genome
Location

Chr.19:582906 on build GRCh38
Cytoband
19p13.3
Assay ID Hs01355132_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 682

Gene Name:

 basigin (Ok blood group)

Gene Aliases:

 5F7, CD147, EMMPRIN, OK, TCSF

Location:

 Chr.19:571277-583493 on Build GRCh38

Assay Gene Location:

 Within Exon 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
BSG NM_001322243.1 8 1149 NP_001309172.1
NM_001728.3 9 1501 NP_001719.2
NM_198589.2 8 1153 NP_940991.1
NM_198590.2 8 1208 NP_940992.1
NM_198591.2 7 1051 NP_940993.1
XM_017027173.1 9 1386 XP_016882662.1
AB085790.1 BAC76828.1
AF548371.1 9 1380 AAN40694.1
AK095912.1 7 1569
AK296858.1 6 666
AK297880.1 9 1359
AK302231.1 8 1021
AY358113.1 9 1372 AAQ88480.1
BC009040.2 8 1016 AAH09040.1
D45131.1 8 1001 BAA08109.1
GU557064.1 8 1175
GU557065.1 7 1018
L10240.1 8 986 AAA68936.1
L20471.1 8 1017 AAB41120.1
M87879.1 8 994 AAA91084.1
X64364.1 8 1029 CAA45716.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv428360 Chr.19:232069 - 702131 on Build GRCh38 Gain RNF126 FSTL3 SHC2 PLPP2 TPGS1 GZMM ODF3L2 LOC101929060 FGF22 MADCAM1 HCN2 CDC34 PRSS57 C2CD4C BSG MIER2 POLRMT THEG
nsv577978 Chr.19:294526 - 782854 on Build GRCh38 Gain RNF126 FSTL3 SHC2 TPGS1 GZMM ODF3L2 LOC101929060 MISP FGF22 MADCAM1 HCN2 LOC101928450 CDC34 PRSS57 C2CD4C PALM BSG MIER2 POLRMT THEG
nsv953938 Chr.19:355801 - 1104501 on Build GRCh38 Deletion MIR4745 RNF126 FSTL3 MIR3187 PRTN3 GZMM ARID3A RNU6-2 ARHGAP45 HCN2 LOC101928450 PRSS57 BSG TMEM259 RNU6-9 THEG PLPPR3 AZU1 CFD SHC2 ABCA7 PTBP1 R3HDM4 KISS1R TPGS1 ELANE LOC105372235 ODF3L2 MISP FGF22 GRIN3B WDR18 POLR2E MADCAM1 CDC34 C2CD4C PALM GPX4 CNN2 POLRMT MED16
dgv6174n54 Chr.19:579450 - 593319 on Build GRCh38 Loss HCN2 BSG
nsv470101 Chr.19:401714 - 1008505 on Build GRCh38 Loss MIR4745 RNF126 FSTL3 MIR3187 PRTN3 GZMM ARID3A HCN2 LOC101928450 PRSS57 BSG RNU6-9 PLPPR3 AZU1 CFD SHC2 PTBP1 R3HDM4 KISS1R TPGS1 ELANE LOC105372235 ODF3L2 MISP FGF22 GRIN3B WDR18 MADCAM1 CDC34 C2CD4C PALM POLRMT MED16
nsv578152 Chr.19:572860 - 583812 on Build GRCh38 Gain BSG

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