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See other TSR3 CNV Assays ›
Gene Symbol
TSR3
Assay Reference Genome
Location

Chr.16:1349929 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01362173_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 115939

Gene Name:

 TSR3, acp transferase ribosome maturation factor

Gene Aliases:

 C16orf42

Location:

 Chr.16:1349240-1351872 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Intron 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TSR3 NM_001001410.2 NP_001001410.1
BC013943.1 AAH13943.1
BC016699.1 AAH16699.1
BC017325.2 AAH17325.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain UBE2I CCDC154 PTX4 TSR3 IFT140 GNPTG UNKL CLCN7 LOC105371045 C16orf91 BAIAP3 TELO2
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR3180-5 HBQ1 LUC7L AMDHD2 AXIN1 NPRL3 NOXO1 DNASE1L2 HBZ CCDC154 SPSB3 MRPL28 CRAMP1 HS3ST6 MIR3177 LOC107987233 MIR3178 RNF151 MAPK8IP3 PIGQ ATP6V0C MIR1225 LOC105371038 NDUFB10 SNORA10 TSC2 LOC100287175 FLJ42627 TBC1D24 MIR940 MIR6768 LOC652276 LOC107984876 SSTR5-AS1 NME3 GFER UNKL CLCN7 ABCA3 MIR3176 RAB11FIP3 LMF1 RPUSD1 MCRIP2 HBM HBA1 CCNF LOC106660606 BRICD5 DDX11L10 RAB26 RHOT2 SOX8 LOC105371184 MSLN CEMP1 EME2 TMEM8A TPSB2 TRAF7 IFT140 MSRB1 FAM173A WASIR2 SSTR5 PRSS29P MIR6511B1 TMEM204 TELO2 ARHGDIG MEIOB PRSS27 MIR5587 NARFL KCTD5 TPSG1 MIR6767 SNHG9 RPL23AP5 LOC105371047 RAB40C HBA2 WDR24 METRN NPW MIR4717 LINC00235 GNPTG ECI1 RPS2 MIR4516 NME4 NTHL1 E4F1 GNG13 SNORD60 WFIKKN1 CCDC78 SLC9A3R2 MIR3677 LOC729652 METTL26 RHBDL1 LMF1-AS1 LOC105371049 NHLRC4 SNHG19 PRR35 FBXL16 JMJD8 LOC105371046 LINC00254 FAHD1 ERVK13-1 LOC100134368 PKD1 HAGH RNPS1 POLR3K STUB1 C16orf91 PGP MIR6859-4 RGS11 UBE2I SNORA64 ABCA17P CHTF18 TPSD1 RPL3L BAIAP3 CAPN15 NUBP2 NTN3 TSR3 LOC101929280 HN1L DECR2 PDPK1 PRR25 MPG WDR90 C16orf59 CASKIN1 IGFALS PTX4 SNORA78 PDIA2 MIR662 HAGHL MLST8 CACNA1H TBL3 TPSAB1 C1QTNF8 SYNGR3 FAM234A ZNF598 SNRNP25 MRPS34 RHBDF1 LOC105371045
nsv974746 Chr.16:1328043 - 1351866 on Build GRCh38 Duplication TSR3 BAIAP3
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss LOC107984876 UBE2I LMF1-AS1 SSTR5-AS1 TPSB2 CACNA1H TPSD1 GNPTG TPSAB1 SSTR5 PRSS29P C1QTNF8 UNKL CLCN7 BAIAP3 CCDC154 TSR3 LMF1 TPSG1 SOX8 LOC105371045 C16orf91
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain UBE2I SSTR5-AS1 TPSB2 CACNA1H TPSD1 GNPTG TPSAB1 SSTR5 PRSS29P C1QTNF8 UNKL BAIAP3 TSR3 TPSG1
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss UBE2I LMF1-AS1 SSTR5-AS1 TPSB2 CACNA1H TPSD1 GNPTG TPSAB1 SSTR5 PRSS29P C1QTNF8 UNKL BAIAP3 TSR3 LMF1 TPSG1 SOX8
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion UBE2I PTX4 TPSB2 IFT140 CACNA1H TPSD1 GNPTG TPSAB1 PRSS29P TMEM204 UNKL CLCN7 BAIAP3 TELO2 CCDC154 TSR3 TPSG1 LOC105371045 LOC105371047 C16orf91
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss UBE2I TSR3 TPSD1 GNPTG TPSAB1 PRSS29P UNKL C16orf91 BAIAP3

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Gene Ontology Categories:

Function(s)


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