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See other LMF1 CNV Assays ›
Gene Symbol
LMF1
Assay Reference Genome
Location

Chr.16:871217 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01364451_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 64788

Gene Name:

 lipase maturation factor 1

Gene Aliases:

 C16orf26, HMFN1876, JFP11, TMEM112, TMEM112A

Location:

 Chr.16:853632-981615 on Build GRCh38

Assay Gene Location:

 Within Exon 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LMF1 NM_022773.2 7 1026 NP_073610.2
NR_033645.1 8 1155
NR_033646.1 9 1333
XM_006720928.2 7 1299 XP_006720991.1
XM_006720929.3 8 1180 XP_006720992.1
XM_011522614.2 7 1024 XP_011520916.1
XM_011522617.2 5 675 XP_011520919.1
XM_017023575.1 7 1024 XP_016879064.1
XM_017023576.1 6 790 XP_016879065.1
XM_017023577.1 8 1455 XP_016879066.1
XM_017023578.1 6 875 XP_016879067.1
XM_017023579.1 6 883 XP_016879068.1
XM_017023580.1 9 1605 XP_016879069.1
AB075873.1 7 1010 BAD38655.1
AK022743.1 7 1024 BAB14218.1
AK025955.1 7 958 BAB15295.1
AK093050.1 4 533
AK125201.1 8 1157
AK225065.1 7 1024
AK225406.1 7 1011
AL832177.1 1 2644
BC010738.1 6 791 AAH10738.2

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv571046 Chr.16:828324 - 1202441 on Build GRCh38 Gain SOX8 SSTR5-AS1 LMF1 LOC107984876 CACNA1H SSTR5 C1QTNF8 LMF1-AS1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MRPS34 ABCA3 WDR90 SNHG9 SOX8 TBL3 MSLN NOXO1 MIR3177 TPSAB1 HBA1 CCNF CRAMP1 MSRB1 SNORD60 LOC729652 MPG PKD1 RHBDL1 HAGHL RNPS1 MIR6767 WDR24 GFER SNORA64 SNHG19 DECR2 CASKIN1 NPRL3 LOC105371047 PDIA2 METRN HBM EME2 NUBP2 RPL23AP5 GNG13 GNPTG PRR25 FAM234A SYNGR3 PDPK1 TSC2 TMEM204 MIR5587 TPSB2 CCDC154 JMJD8 RHOT2 MAPK8IP3 NTHL1 SSTR5-AS1 LOC100287175 NARFL NTN3 ARHGDIG MIR4516 LUC7L BRICD5 HBA2 RGS11 CCDC78 PRSS27 ECI1 TBC1D24 SNRNP25 NME3 LMF1-AS1 MIR3180-5 DDX11L10 HS3ST6 TRAF7 ZNF598 MIR6511B1 MRPL28 BAIAP3 LOC105371038 C16orf91 CACNA1H NPW MIR662 RAB11FIP3 MIR3677 MEIOB RAB40C LOC652276 DNASE1L2 LOC105371045 MIR4717 RNF151 RPS2 RAB26 NME4 IGFALS MIR6768 C16orf59 ABCA17P UNKL MCRIP2 FBXL16 HN1L LMF1 RHBDF1 STUB1 LOC105371049 METTL26 SLC9A3R2 IFT140 LINC00235 CHTF18 TPSD1 HAGH SPSB3 UBE2I ATP6V0C LOC101929280 SNORA78 E4F1 LOC100134368 RPL3L KCTD5 CAPN15 HBQ1 C1QTNF8 TELO2 ERVK13-1 PIGQ RPUSD1 FAHD1 POLR3K LOC107984876 AMDHD2 MIR3176 MIR6859-4 MIR1225 MLST8 NDUFB10 MIR940 LINC00254 HBZ LOC107987233 MIR3178 WFIKKN1 WASIR2 SNORA10 CLCN7 LOC105371184 CEMP1 PRR35 LOC105371046 PGP LOC106660606 SSTR5 PRSS29P NHLRC4 PTX4 TSR3 TPSG1 TMEM8A AXIN1 FLJ42627 FAM173A
esv3637586 Chr.16:798995 - 892120 on Build GRCh38 Loss GNG13 PRR25 LMF1
esv3637595 Chr.16:859147 - 890552 on Build GRCh38 Loss LMF1
nsv1046349 Chr.16:819378 - 942590 on Build GRCh38 Loss LMF1 LOC107984876 LMF1-AS1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion RAB40C GNG13 WDR90 PRR25 PIGQ RPUSD1 LOC107984876 MIR5587 JMJD8 RHOT2 MIR3176 SOX8 MSLN SSTR5-AS1 LOC100287175 NARFL MCRIP2 LOC107987233 FBXL16 WFIKKN1 CCDC78 LOC105371184 PRR35 LMF1 STUB1 METTL26 RHBDL1 LINC00235 CHTF18 HAGHL SSTR5 LMF1-AS1 WDR24 LOC101929280 NHLRC4 CAPN15 LOC105371038 METRN C1QTNF8 FAM173A MIR662 RAB11FIP3

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