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See other ATP2B2 CNV Assays ›
Gene Symbol
ATP2B2
Assay Reference Genome
Location

Chr.3:10329057 on build GRCh38
Cytoband
3p25.3
Assay ID Hs01379347_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 491

Gene Name:

 ATPase plasma membrane Ca2+ transporting 2

Gene Aliases:

 PMCA2, PMCA2a, PMCA2i

Location:

 Chr.3:10324023-10707962 on Build GRCh38

Assay Gene Location:

 Within Exon 32
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2B2 NM_001001331.2 23 3928 NP_001001331.1
NM_001683.3 20 3793 NP_001674.2
XM_005265179.4 25 4112 XP_005265236.1
XM_006713175.3 25 3996 XP_006713238.1
XM_011533752.2 23 3901 XP_011532054.1
XM_017006481.1 26 4239 XP_016861970.1
XM_017006482.1 23 3930 XP_016861971.1
XM_017006483.1 21 3940 XP_016861972.1
XM_017006484.1 23 3903 XP_016861973.1
XM_017006485.1 24 4207 XP_016861974.1
XM_017006486.1 25 4262 XP_016861975.1
XM_017006487.1 22 3860 XP_016861976.1
XM_017006488.1 22 4114 XP_016861977.1
XM_017006489.1 23 4036 XP_016861978.1
XM_017006490.1 21 3954 XP_016861979.1
XM_017006491.1 22 4126 XP_016861980.1
XM_017006492.1 24 4121 XP_016861981.1
AB210008.1 20 3866
DQ201777.1 12 1962
DQ201778.1 8 1059
L00620.1 19 3372 AAA51893.1
L20977.1 22 3930 AAA50877.1
M97260.1 20 3774 AAA36456.1
S95758.1 19 3057 AAA08376.1
U15688.1 AAA60985.1
X63575.1 22 3559 CAA45131.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion FANCD2OS GHRLOS SLC6A1 SLC6A1-AS1 MIR378B VHL IRAK2 TAMM41 TATDN2 ATG7 FANCD2 VGLL4 BRK1 LINC00606 GHRL SEC13 ATP2B2-IT2 LINC00852 MIR885 HRH1 LOC101927467 SLC6A11 ATP2B2
nsv508903 Chr.3:10275353 - 10401894 on Build GRCh38 Insertion GHRLOS GHRL SEC13 LINC00852 MIR378B MIR885 TATDN2 ATP2B2
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion FANCD2OS SLC6A1 VHL IRAK2 FANCD2 LINC00606 GHRL SEC13 LINC00852 LOC101927467 ATP2B2 EMC3 GHRLOS SLC6A1-AS1 MIR378B FANCD2P2 LOC401052 TAMM41 TATDN2 ATG7 VGLL4 BRK1 ATP2B2-IT2 MIR885 HRH1 SLC6A11 CIDECP
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion FANCD2OS GHRLOS SLC6A1 SLC6A1-AS1 MIR378B FANCD2P2 VHL IRAK2 TAMM41 TATDN2 ATG7 FANCD2 VGLL4 BRK1 LINC00606 GHRL SEC13 ATP2B2-IT2 LINC00852 MIR885 HRH1 LOC101927467 SLC6A11 ATP2B2
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion FANCD2OS GHRLOS SLC6A1 SLC6A1-AS1 MIR378B FANCD2P2 VHL IRAK2 TAMM41 TATDN2 ATG7 FANCD2 VGLL4 BRK1 LINC00606 GHRL SEC13 ATP2B2-IT2 LINC00852 MIR885 HRH1 LOC101927467 SLC6A11 ATP2B2
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion FANCD2OS SLC6A1 VHL IRAK2 FANCD2 LINC00606 GHRL SEC13 LINC00852 LOC101927467 ATP2B2 EMC3 GHRLOS SLC6A1-AS1 MIR378B FANCD2P2 LOC401052 EMC3-AS1 TAMM41 TATDN2 ATG7 VGLL4 BRK1 ATP2B2-IT2 MIR885 HRH1 SLC6A11 CIDECP

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