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See other GNPTG CNV Assays ›
Gene Symbol
GNPTG
Assay Reference Genome
Location

Chr.16:1362065 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01380488_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 84572

Gene Name:

 N-acetylglucosamine-1-phosphate transferase gamma subunit

Gene Aliases:

 C16orf27, GNPTAG, LP2537, RJD9

Location:

 Chr.16:1351899-1363351 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 6 - Exon 7
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
GNPTG NM_032520.4 NP_115909.1
XM_017023782.1 XP_016879271.1
XM_017023783.1 XP_016879272.1
AF302786.1 AAG27706.1
AK126110.1
AK312067.1
AY203933.1 AAP34456.1
BC014592.1 AAH14592.1
BC131525.1
BU145878.1
BX398427.1
DT219524.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2762143 Chr.16:1270592 - 1519404 on Build GRCh38 Gain GNPTG C16orf91 LOC105371045 UNKL CCDC154 TSR3 TELO2 UBE2I PTX4 IFT140 CLCN7 BAIAP3
dgv473e214 Chr.16:1356674 - 1364974 on Build GRCh38 Loss GNPTG UNKL
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication FAHD1 SSTR5 HBA1 NUBP2 SSTR5-AS1 NPW CHTF18 RHBDL1 PRR25 MSRB1 NTHL1 CACNA1H LINC00235 LUC7L ZNF598 JMJD8 ERVK13-1 RHBDF1 WASIR2 SNORA10 LOC100134368 MAPK8IP3 WDR90 TELO2 RHOT2 TPSG1 DNASE1L2 NARFL LOC107987233 GNG13 ABCA17P HBA2 LOC652276 LMF1 LOC105371049 MPG MIR3677 TMEM204 CEMP1 HBZ RPS2 MCRIP2 ATP6V0C MIR6511B1 MRPS34 MIR3180-5 LMF1-AS1 SNHG9 TBC1D24 MIR6768 HAGHL METTL26 MIR940 SLC9A3R2 RGS11 E4F1 C16orf91 LOC107984876 SNRNP25 UNKL MIR3178 FBXL16 MLST8 SYNGR3 NDUFB10 MIR3176 C16orf59 TPSAB1 SNORA64 NHLRC4 UBE2I LOC105371184 HS3ST6 PDPK1 CLCN7 BAIAP3 RNF151 METRN PKD1 IGFALS GNPTG TSC2 NPRL3 ABCA3 TRAF7 CCDC154 STUB1 HBQ1 NME4 MIR4516 HN1L MIR4717 RPUSD1 MRPL28 NOXO1 ARHGDIG CAPN15 PGP PRR35 TMEM8A PDIA2 MIR662 KCTD5 SPSB3 TBL3 LOC105371046 LOC105371045 TSR3 MIR6859-4 MIR1225 PIGQ AXIN1 LOC101929280 NTN3 WFIKKN1 ECI1 SOX8 CASKIN1 SNORA78 WDR24 IFT140 DDX11L10 MIR6767 NME3 LOC105371047 MEIOB FLJ42627 PRSS29P GFER LOC105371038 TPSD1 LINC00254 LOC100287175 RAB26 RPL23AP5 RAB11FIP3 HAGH EME2 FAM234A LOC106660606 SNORD60 MSLN MIR3177 RPL3L LOC729652 TPSB2 POLR3K AMDHD2 C1QTNF8 RNPS1 CRAMP1 DECR2 SNHG19 HBM PRSS27 BRICD5 RAB40C CCNF MIR5587 PTX4 CCDC78 FAM173A
nsv471066 Chr.16:893361 - 1482836 on Build GRCh38 Loss GNPTG SSTR5 C16orf91 LOC105371045 TPSB2 LOC107984876 C1QTNF8 UNKL CCDC154 TSR3 PRSS29P SSTR5-AS1 TPSG1 TPSD1 TPSAB1 CACNA1H LMF1-AS1 SOX8 LMF1 UBE2I CLCN7 BAIAP3
dgv2692n100 Chr.16:1002943 - 1394728 on Build GRCh38 Gain GNPTG SSTR5 TPSB2 C1QTNF8 UNKL TSR3 PRSS29P SSTR5-AS1 TPSG1 TPSD1 TPSAB1 CACNA1H UBE2I BAIAP3
nsv428316 Chr.16:929650 - 1363252 on Build GRCh38 Gain+Loss GNPTG SSTR5 TPSB2 C1QTNF8 UNKL TSR3 PRSS29P SSTR5-AS1 TPSG1 TPSD1 TPSAB1 CACNA1H LMF1-AS1 SOX8 LMF1 UBE2I BAIAP3
nsv952899 Chr.16:1142501 - 1535899 on Build GRCh38 Deletion GNPTG TMEM204 C16orf91 LOC105371047 LOC105371045 TPSB2 UNKL CCDC154 TSR3 PRSS29P TELO2 TPSG1 TPSD1 TPSAB1 CACNA1H UBE2I PTX4 IFT140 CLCN7 BAIAP3
nsv1046314 Chr.16:1238517 - 1426464 on Build GRCh38 Loss TPSAB1 GNPTG C16orf91 UNKL TSR3 PRSS29P UBE2I TPSD1 BAIAP3
esv3637616 Chr.16:1356693 - 1364925 on Build GRCh38 Gain GNPTG UNKL

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