Hs01380885_cn

• Gene Symbol: LRCH4
• Assay Reference Genome Location: Chr.7:100577402 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 4034
• Gene Name: leucine rich repeats and calponin homology domain containing 4
• Gene Aliases: LRN, LRRN1, LRRN4, PP14183
• Location: Chr.7:100574011-100586188 on Build GRCh38
• Assay Gene Location: Overlaps Intron 10 - Exon 11

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LRCH4	NM_001289934.1			NP_001276863.1
	NM_002319.4			NP_002310.2
	AF459638.1			AAQ04768.1
	AK074833.1
	AK097420.1
	AK128189.1
	AK302410.1
	BC007634.1			AAH07634.1
	BC018529.1			AAH18529.3

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv607932	Chr.7:100574872 - 100585068 on Build GRCh38	Loss	FBXO24 LRCH4
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	MIR4653 EPHB4 ZNHIT1 PLOD3 SPDYE3 PPP1R35 AGFG2 GIGYF1 NAT16 TAF6 EPO MIR106B CNPY4 NYAP1 MOSPD3 COPS6 GNB2 VGF PILRA MUC17 LAMTOR4 ACHE PCOLCE-AS1 FIS1 ACTL6B CLDN15 MIR6840 MIR25 ZAN LRCH4 FBXO24 SERPINE1 AZGP1P1 LOC102724094 PILRB ZSCAN21 C7orf43 STAG3 PMS2P1 AZGP1 STAG3L5P MEPCE AP1S1 LOC105375429 UFSP1 GPC2 ZASP AP4M1 C7orf61 GATS MOGAT3 MUC3A MIR6875 STAG3L5P-PVRIG2P-PILRB MIR4658 PVRIG ZCWPW1 TRIM56 PCOLCE PVRIG2P ZKSCAN1 ZNF3 GAL3ST4 SRRT POP7 MCM7 TFR2 SLC12A9 SAP25 MUC12 MIR93 MBLAC1 TSC22D4 TRIP6
nsv951386	Chr.7:100566478 - 100682977 on Build GRCh38	Deletion	FBXO24 GNB2 PCOLCE PCOLCE-AS1 ACTL6B LOC105375429 TFR2 AGFG2 GIGYF1 ZASP SAP25 LRCH4 MOSPD3
nsv831072	Chr.7:100564880 - 100765212 on Build GRCh38	Loss	FBXO24 GNB2 PCOLCE PCOLCE-AS1 ACTL6B POP7 LOC105375429 ZAN TFR2 AGFG2 GIGYF1 ZASP SAP25 EPO LRCH4 MOSPD3
nsv5868	Chr.7:100572375 - 100617023 on Build GRCh38	Deletion	FBXO24 ZASP SAP25 PCOLCE LRCH4 PCOLCE-AS1 MOSPD3

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

nervous system development

Function(s)

protein binding