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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49692397 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01381430_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 6 - Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AF357970.1 AAL99615.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1
BP194020.1
DB456457.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss RRAS PRMT1 MIR5088 CPT1C PRRG2 NOSIP IRF3 SCAF1 PRR12 ADM5 BCL2L12
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss RRAS PRMT1 MIR5088 CPT1C PRRG2 NOSIP IRF3 SCAF1 PRR12 ADM5 BCL2L12
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss SNAR-A3 PRMT1 IRF3 ATF5 FTL BSPH1 LOC101928295 SNAR-C4 LIN7B NOSIP PRR12 CGB5 DBP SLC6A16 SNAR-A9 PLA2G4C C19orf68 TRPM4 BCAT2 SPHK2 SNAR-A12 PTOV1-AS2 SNAR-C3 SNAR-A14 ALDH16A1 RASIP1 GYS1 SIGLEC11 DHDH RPL18 CPT1C NUCB1 SEC1P FLJ26850 PPP1R15A LMTK3 IL4I1 TSKS RRAS PTOV1-AS1 MIR4324 LOC100287477 CD37 CABP5 MAMSTR AP2A1 VRK3 SNAR-B1 PTH2 DKKL1 LIG1 CYTH2 SNAR-C1 MIR5088 CGB2 SNAR-A2 ZNF473 SNORD33 NUP62 FUT2 LHB PLEKHA4 SNORD32A CGB7 SCAF1 NTF4 MIR150 FUZ GRIN2D MIR4751 LOC101059948 CCDC155 FGF21 RPL13A PPFIA3 PTOV1 SNORD34 SNAR-A6 TULP2 EMP3 LOC105447645 SNAR-D TMEM143 IZUMO1 SNAR-A1 RCN3 TEAD2 BAX NUCB1-AS1 FUT1 SNAR-G1 SNORD35B SPACA4 FAM83E SNAR-A5 PIH1D1 SNORD35A CARD8 CCDC114 SNAR-A11 KCNA7 LOC105372430 MIR4749 RPS11 GFY CGB3 AKT1S1 MED25 CARD8-AS1 BCL2L12 SNAR-A10 SLC17A7 FCGRT GRWD1 SULT2B1 SNAR-A8 KCNJ14 PRRG2 MIR4750 SNAR-A7 SNAR-G2 HSD17B14 ZNF114 SIGLEC16 ELSPBP1 SNAR-B2 FLT3LG MIR6798 SNAR-C2 NTN5 MIR6799 TBC1D17 CGB1 C19orf73 KDELR1 SYNGR4 SNAR-A4 CA11 PLA2G4C-AS1 CGB8 HRC PNKP SNAR-A13 MIR6800 SNRNP70 SNAR-C5 ADM5 RUVBL2
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain RRAS PRMT1 MIR5088 CPT1C IRF3 SCAF1 PRR12 ADM5 BCL2L12
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion NUP62 PRMT1 IRF3 MIR4749 ATF5 SCAF1 AKT1S1 MED25 BCL2L12 FUZ MIR4751 CPT1C PRRG2 NOSIP MIR4750 PRR12 PTOV1 IL4I1 TSKS RRAS PTOV1-AS1 MIR6799 AP2A1 TBC1D17 MIR5088 PNKP PTOV1-AS2 MIR6800 ADM5
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain RRAS PRMT1 MIR5088 CPT1C PRRG2 NOSIP IRF3 SCAF1 PRR12 ADM5 BCL2L12
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion SNORD33 PRMT1 SNORD32A IRF3 RPS11 SCAF1 MED25 BCL2L12 FCGRT MIR150 FUZ CPT1C PRRG2 NOSIP RPL13A PRR12 TSKS RRAS PTOV1-AS1 SNORD34 MIR6799 AP2A1 RCN3 MIR5088 SNORD35B MIR6800 SNORD35A ADM5

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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