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See other PIGQ CNV Assays ›
Gene Symbol
PIGQ
Assay Reference Genome
Location

Chr.16:574474 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01382673_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9091

Gene Name:

 phosphatidylinositol glycan anchor biosynthesis class Q

Gene Aliases:

 GPI1, c407A10.1

Location:

 Chr.16:569968-584136 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIGQ NM_004204.3 2 538 NP_004195.2
NM_148920.2 2 538 NP_683721.1
AB003723.1 2 502 BAA24948.1
AF030177.1 2 471 AAC32661.1
AK300297.1 2 505
AK314361.1 3 567
BC006377.2 2 488 AAH06377.1
DA206420.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833113 Chr.16:506513 - 628160 on Build GRCh38 Loss PRR35 RAB40C RAB11FIP3 NHLRC4 LOC107987233 LOC101929280 MIR3176 PIGQ MIR5587 LINC00235 CAPN15
esv3637579 Chr.16:574322 - 585512 on Build GRCh38 Loss PIGQ
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication TPSAB1 SNRNP25 GNG13 RAB11FIP3 MIR6767 TPSB2 RHOT2 METTL26 DECR2 MIR3677 UBE2I LOC105371184 FBXL16 MIR3177 LOC105371046 MIR6859-4 LOC101929280 ABCA17P HBZ MIR1225 NTHL1 HBM STUB1 LINC00235 MIR6511B1 CCDC154 CLCN7 SNORD60 LOC105371038 TRAF7 ECI1 LOC105371047 LOC107984876 MIR4516 WDR24 HBA1 KCTD5 TPSG1 LOC106660606 SNORA10 LMF1 AXIN1 FLJ42627 ZNF598 LUC7L SOX8 LOC107987233 RPS2 PDPK1 NOXO1 JMJD8 AMDHD2 SLC9A3R2 PKD1 RPL3L CASKIN1 TBC1D24 RPL23AP5 DNASE1L2 SNHG19 PRR25 NUBP2 RGS11 E4F1 ATP6V0C C16orf59 RNPS1 ERVK13-1 TMEM8A WFIKKN1 C16orf91 GNPTG MIR3176 MRPS34 ABCA3 PRSS29P POLR3K PRR35 MAPK8IP3 MIR5587 HBQ1 HN1L CCDC78 PIGQ C1QTNF8 SNORA64 MIR662 GFER MEIOB NME3 LOC729652 RHBDL1 MCRIP2 CHTF18 NARFL CAPN15 EME2 RAB40C NDUFB10 WDR90 NHLRC4 HBA2 METRN BAIAP3 CACNA1H LOC100287175 LOC105371049 SNORA78 NPRL3 IFT140 PTX4 CRAMP1 DDX11L10 MPG TMEM204 PGP CCNF SYNGR3 LOC100134368 MIR940 CEMP1 MSRB1 HAGH UNKL SSTR5-AS1 LOC652276 ARHGDIG WASIR2 TSC2 MRPL28 LMF1-AS1 SPSB3 MSLN TPSD1 FAM234A FAM173A MLST8 TBL3 RHBDF1 SNHG9 RAB26 MIR3178 PRSS27 FAHD1 BRICD5 SSTR5 NTN3 LOC105371045 MIR6768 MIR4717 IGFALS TELO2 LINC00254 TSR3 NPW RNF151 RPUSD1 HAGHL NME4 MIR3180-5 PDIA2 HS3ST6
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss GNG13 RAB11FIP3 RHBDL1 PRR25 MCRIP2 RHOT2 METTL26 CHTF18 MSLN NARFL LOC105371184 FBXL16 FAM173A CAPN15 WFIKKN1 RAB40C WDR90 NHLRC4 LOC101929280 MIR3176 STUB1 LINC00235 METRN LOC100287175 LOC105371038 PRR35 WDR24 MIR5587 LOC107987233 CCDC78 RPUSD1 PIGQ JMJD8 HAGHL MIR662
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss GNG13 RAB11FIP3 RHBDL1 PRR25 MCRIP2 RHOT2 METTL26 CHTF18 MSLN NARFL LOC105371184 FBXL16 FAM173A CAPN15 WFIKKN1 RAB40C WDR90 NHLRC4 LOC101929280 MIR3176 STUB1 LINC00235 METRN LOC100287175 LOC105371038 PRR35 WDR24 MIR5587 LOC107987233 CCDC78 RPUSD1 PIGQ JMJD8 HAGHL MIR662
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion GNG13 RAB11FIP3 RHBDL1 SSTR5-AS1 PRR25 MCRIP2 RHOT2 METTL26 CHTF18 LMF1-AS1 MSLN NARFL LOC105371184 FBXL16 FAM173A CAPN15 WFIKKN1 RAB40C WDR90 NHLRC4 LOC101929280 MIR3176 STUB1 LINC00235 METRN LOC100287175 LOC105371038 PRR35 SSTR5 LOC107984876 WDR24 MIR5587 LMF1 SOX8 LOC107987233 CCDC78 RPUSD1 PIGQ JMJD8 HAGHL C1QTNF8 MIR662
dgv4823n54 Chr.16:562698 - 662867 on Build GRCh38 Loss LOC105371038 WFIKKN1 PRR35 RAB40C WDR90 NHLRC4 LOC107987233 LOC101929280 PIGQ MCRIP2 METTL26 LOC100287175
nsv457304 Chr.16:554554 - 611142 on Build GRCh38 Gain PRR35 RAB40C NHLRC4 LOC107987233 LOC101929280 PIGQ CAPN15
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication GNG13 RAB11FIP3 RHBDL1 PRR25 MCRIP2 RHOT2 METTL26 CHTF18 MSLN NARFL LOC105371184 FBXL16 FAM173A CAPN15 WFIKKN1 RAB40C WDR90 NHLRC4 LOC101929280 MIR3176 STUB1 LINC00235 METRN LOC100287175 LOC105371038 PRR35 WDR24 MIR5587 LOC107987233 CCDC78 RPUSD1 PIGQ JMJD8 HAGHL MIR662

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More Information


Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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