Hs01389587_cn

• Gene Symbol: LOC101928525
• Assay Reference Genome Location: Chr.9:135504001 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 101928525
• Gene Name: uncharacterized LOC101928525
• Gene Aliases: -
• Location: Chr.9:135503273-135506447 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101928525	NR_121579.1

Target Gene Details

• Entrez Gene ID: 51116
• Gene Name: mitochondrial ribosomal protein S2
• Gene Aliases: CGI-91, MRP-S2, S2mt
• Location: Chr.9:135499989-135504673 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MRPS2	NM_016034.4	4	839	NP_057118.1
	NR_051967.1	5	982
	NR_051968.1	5	1037
	NR_051969.1	4	1042
	NR_051970.1	4	984
	XM_006717136.3	5	963	XP_006717199.1
	AB055388.1	4	763	BAB62529.1
	AF151849.1	4	763	AAD34086.1
	AL555185.3
	BC004905.2	1	334	AAH04905.2
	BC008017.1	4	775	AAH08017.1
	BC013108.2	4	783	AAH13108.1
	BQ723448.1
	BU169388.1
	BX362434.2	4	833

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv615842	Chr.9:135113632 - 135571320 on Build GRCh38	Gain	LOC401557 OBP2A PAEP C9orf116 LCN1 OLFM1 PPP1R26 MRPS2 LOC101928525 PPP1R26-AS1 C9orf62
esv2739138	Chr.9:132727483 - 135521553 on Build GRCh38	Deletion	SURF6 SURF4 MIR548AW VAV2 GTF3C5 LOC101928193 STKLD1 MIR3689F C9orf116 AK8 FCN1 CEL SNORD36A DBH SNORD36B ADAMTSL2 RNU6ATAC CACFD1 CELP RXRA C9orf62 MIR3689D2 MED22 LOC100996574 REXO4 OLFM1 MRPS2 TSC1 LOC105376306 PPP1R26 RPL7A OBP2B GBGT1 MIR3689E FCN2 SURF1 COL5A1 SPACA9 BRD3 RALGDS SNORD24 LOC101928525 GFI1B MIR4669 SNORD141A LINC00094 MIR6877 DBH-AS1 LOC100130548 ADAMTS13 TMEM8C SNORD36C FAM163B SLC2A6 LOC101448202 WDR5 MIR3689B SURF2 SARDH ABO MIR3689A MIR3689D1 LOC401557 LCN1 COL5A1-AS1 MIR3689C PPP1R26-AS1
nsv469913	Chr.9:135457315 - 135504405 on Build GRCh38	Loss	C9orf116 PPP1R26 MRPS2 LOC101928525 PPP1R26-AS1
esv3573422	Chr.9:135497894 - 135508556 on Build GRCh38	Loss	C9orf116 MRPS2 LOC101928525
nsv466656	Chr.9:135491367 - 135577889 on Build GRCh38	Gain	OBP2A PAEP C9orf116 LCN1 LINC01502 MRPS2 LOC101928525

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

ribosomal protein

Gene Ontology Categories:

Process(es)

positive regulation of defense response to virus by host
translation
mitochondrial translation
mitophagy in response to mitochondrial depolarization
xenophagy

Function(s)

structural constituent of ribosome