Hs01391078_cn

• Gene Symbol: SEMA6C
• Assay Reference Genome Location: Chr.1:151136458 on build GRCh38
• Cytoband: 1q21.3

Target Gene Details

• Entrez Gene ID: 10500
• Gene Name: semaphorin 6C
• Gene Aliases: SEMAY, m-SemaY, m-SemaY2
• Location: Chr.1:151131685-151148408 on Build GRCh38
• Assay Gene Location: Overlaps Intron 13 - Exon 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SEMA6C	NM_001178061.1			NP_001171532.1
	NM_001178062.1			NP_001171533.1
	NM_030913.4			NP_112175.2
	XM_005244835.3			XP_005244892.1
	XM_017000075.1			XP_016855564.1
	XM_017000076.1			XP_016855565.1
	XM_017000077.1			XP_016855566.1
	XM_017000078.1			XP_016855567.1
	XM_017000079.1			XP_016855568.1
	XM_017000080.1			XP_016855569.1
	XM_017000081.1			XP_016855570.1
	XM_017000082.1			XP_016855571.1
	AB022434.1			BAB20670.1
	AB058772.1
	AF339152.1			AAL72098.1
	AF339153.1			AAL72099.1
	AF339154.1			AAL72100.1
	AK302862.1
	BC114521.1			AAI14522.1
	BC114623.1			AAI14624.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv522840	Chr.1:150961247 - 151375270 on Build GRCh38	Gain	PIP5K1A VPS72 PI4KB ZNF687 SCNM1 SELENBP1 MLLT11 GBAT2 SETDB1 PSMD4 RFX5 LYSMD1 LOC100507670 TMOD4 CDC42SE1 C1orf56 TNFAIP8L2-SCNM1 CERS2 SEMA6C PRUNE1 GABPB2 TNFAIP8L2 FAM63A BNIPL ANXA9

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

membrane-bound signaling molecule, intercellular signal molecule

Gene Ontology Categories:

Process(es)

neural crest cell migration
axon guidance
positive regulation of cell migration
negative regulation of axon extension involved in axon guidance
negative chemotaxis
semaphorin-plexin signaling pathway

Function(s)

semaphorin receptor binding
chemorepellent activity