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See other TMEM170A CNV Assays ›
Gene Symbol
TMEM170A
Assay Reference Genome
Location

Chr.16:75447432 on build GRCh38
Cytoband
16q23.1
Assay ID Hs01401958_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 124491

Gene Name:

 transmembrane protein 170A

Gene Aliases:

 TMEM170

Location:

 Chr.16:75443060-75464757 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TMEM170A NM_001304996.1 3 629 NP_001291925.1
NM_001304997.1 3 613 NP_001291926.1
NM_001304998.1 3 425 NP_001291927.1
NM_145254.2 3 698 NP_660297.1
XM_011522869.2 4 720 XP_011521171.1
XM_017022939.1 3 955 XP_016878428.1
XM_017022940.1 4 649 XP_016878429.1
XM_017022941.1 3 514 XP_016878430.1
XM_017022942.1 3 892 XP_016878431.1
XM_017022943.1 3 561 XP_016878432.1
AK094930.1 3 613
AK298475.1 3 581
BC018082.1 3 647 AAH18082.1
BX647432.1 3 581
BX648429.1 3 582
BX648484.1 3 582
DA370427.1 3 425

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1063718 Chr.16:75362071 - 75574173 on Build GRCh38 Gain TMEM231 TMEM170A CFDP1 GABARAPL2 CHST6 CHST5
esv2758657 Chr.16:75385716 - 75543073 on Build GRCh38 Gain TMEM231 TMEM170A CFDP1 CHST6 CHST5
nsv521596 Chr.16:75432798 - 75452750 on Build GRCh38 Loss TMEM170A CFDP1
nsv525955 Chr.16:75439434 - 75594447 on Build GRCh38 Loss TMEM231 TMEM170A GABARAPL2 CHST6 CHST5
nsv1065995 Chr.16:75339858 - 75592129 on Build GRCh38 Loss TMEM231 TMEM170A CFDP1 GABARAPL2 CHST6 CHST5

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More Information


Additional Information:

For this assay, SNP(s) [rs79822972] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Gene Ontology Categories:

Function(s) Process(es)


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