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Gene Symbol
KIFC1
Assay Reference Genome
Location

Chr.6:33404047 on build GRCh38
Cytoband
6p21.32
Assay ID Hs01415174_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 3833

Gene Name:

 kinesin family member C1

Gene Aliases:

 HSET, KNSL2

Location:

 Chr.6:33391524-33410226 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
KIFC1 NM_002263.3 6 1124 NP_002254.2
XM_011514585.1 6 830 XP_011512887.1
XM_011514587.2 6 830 XP_011512889.1
XM_017010836.1 6 830 XP_016866325.1
XM_017010837.1 6 939 XP_016866326.1
AJ010479.1 6 837 CAA09217.1
AK297378.1 6 737
AK303239.1 6 764
BC000712.2 6 832 AAH00712.2
BC063567.1 6 782 AAH63567.1
BC073878.1 6 817 AAH73878.1
BC098438.1 6 814 AAH98438.1
BC121041.1 6 755
BC121042.1 6 755
D14678.1 1 214 BAA03509.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv830637 Chr.6:33361588 - 33542927 on Build GRCh38 Loss KIFC1 MIR5004 CUTA SYNGAP1 ZBTB9 PHF1
nsv830635 Chr.6:33270228 - 33446010 on Build GRCh38 Loss ZBTB22 KIFC1 PFDN6 MIR5004 DAXX MIR6873 B3GALT4 WDR46 CUTA MIR6834 SYNGAP1 TAPBP RGL2 VPS52 RPS18 PHF1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion SKIV2L PRRT1 DAXX HSD17B8 VWA7 GPSM3 LTA ZBTB9 HLA-DMA APOM MICB CSNK2B HCG26 RING1 TAP2 DDX39B SAPCD1 C4A MIR6873 HLA-DOB HCG25 LY6G5C TNXA HLA-DPB1 SLC44A4 COL11A2 ATF6B C4B MIR1236 LOC100294145 EGFL8 HCP5 MIR6833 LSM2 CUTA MIR6834 HCG24 C2-AS1 LOC100287329 RPS18 HLA-DQA1 VARS PBX2 PSMB8 HLA-DPB2 RNF5 HLA-DRB5 C6orf10 CYP21A1P PRRC2A DXO NFKBIL1 CLIC1 PPT2-EGFL8 ZBTB22 PPP1R2P1 B3GALT4 RXRB NOTCH4 HCG23 LY6G5B TNF CFB LOC100507547 SNORD48 VPS52 NEU1 AIF1 ATP6V1G2 HLA-DQA2 FKBPL NCR3 KIFC1 SAPCD1-AS1 MIR5004 ZBTB12 LST1 TAPBP C2 NELFE C6orf25 BTNL2 MIR3135B ABHD16A HLA-DOA LY6G6F PPT2 SNORD84 MIR6832 ATP6V1G2-DDX39B TAP1 CYP21A2 PFDN6 LY6G6C HSPA1L C6orf48 HLA-DRA SNORA38 HLA-DQB1 SNORD52 AGER LOC101929163 HLA-DPA1 SLC39A7 PHF1 PSMB8-AS1 AGPAT1 MSH5 LTB SNORD117 MIR219A1 WDR46 LOC102725068 HLA-DRB1 EHMT2 RGL2 HLA-DRB6 BAG6 MIR4646 HLA-DQB2 MSH5-SAPCD1 TNXB DDX39B-AS1 PSMB9 STK19 LY6G6D HSPA1A SYNGAP1 DDAH2 HSPA1B HLA-DQB1-AS1 BRD2 HLA-DMB MIR6721 MCCD1 LY6G6E GPANK1 C6orf47
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion SKIV2L PRRT1 DAXX HSD17B8 VWA7 GPSM3 LTA ZBTB9 HLA-DMA APOM MICB CSNK2B HCG26 RING1 TAP2 DDX39B SAPCD1 C4A MIR6873 HLA-DOB HCG25 LY6G5C TNXA HLA-DPB1 SLC44A4 COL11A2 ATF6B C4B MIR1236 LOC100294145 EGFL8 HCP5 MIR6833 LSM2 CUTA MIR6834 HCG24 C2-AS1 LOC100287329 RPS18 HLA-DQA1 VARS PBX2 PSMB8 HLA-DPB2 RNF5 HLA-DRB5 C6orf10 CYP21A1P PRRC2A DXO NFKBIL1 CLIC1 PPT2-EGFL8 ZBTB22 PPP1R2P1 B3GALT4 RXRB NOTCH4 HCG23 LY6G5B TNF CFB LOC100507547 SNORD48 VPS52 NEU1 AIF1 ATP6V1G2 HLA-DQA2 FKBPL NCR3 KIFC1 SAPCD1-AS1 MIR5004 ZBTB12 LST1 TAPBP C2 NELFE C6orf25 BTNL2 MIR3135B ABHD16A HLA-DOA LY6G6F PPT2 SNORD84 MIR6832 ATP6V1G2-DDX39B TAP1 CYP21A2 PFDN6 LY6G6C HSPA1L C6orf48 HLA-DRA SNORA38 HLA-DQB1 SNORD52 AGER LOC101929163 HLA-DPA1 SLC39A7 PHF1 PSMB8-AS1 AGPAT1 MSH5 LTB SNORD117 MIR219A1 WDR46 LOC102725068 HLA-DRB1 EHMT2 RGL2 HLA-DRB6 BAG6 MIR4646 HLA-DQB2 MSH5-SAPCD1 TNXB DDX39B-AS1 PSMB9 STK19 LY6G6D HSPA1A SYNGAP1 DDAH2 HSPA1B HLA-DQB1-AS1 BRD2 HLA-DMB MIR6721 MCCD1 LY6G6E GPANK1 C6orf47
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion PSMB8-AS1 KIFC1 MIR5004 DAXX HSD17B8 MIR219A1 WDR46 CUTA MIR6834 HCG24 TAPBP ZBTB9 RGL2 HLA-DMA RPS18 HLA-DQA1 PSMB8 HLA-DPB2 MIR3135B HLA-DOA RING1 TAP2 HLA-DQB2 TAP1 PSMB9 ZBTB22 PFDN6 MIR6873 PPP1R2P1 B3GALT4 RXRB HLA-DOB HCG25 SYNGAP1 HLA-DPB1 COL11A2 HLA-DQB1-AS1 VPS52 BRD2 HLA-DMB HLA-DQB1 LOC100294145 HLA-DQA2 HLA-DPA1 SLC39A7 PHF1

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More Information


Additional Information:

For this assay, SNP(s) [rs142313923] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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