Genomic Map
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Target Gene Details
Entrez Gene ID: | 200172 |
Gene Name: | schlafen like 1 |
Gene Aliases: |
- |
Location: |
Chr.1:41015597-41023444 on Build GRCh38 |
Assay Gene Location: | Within Exon 3 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SLFNL1 | NM_001168247.2 | 4 | 1315 | NP_001161719.1 |
| NM_001300859.1 | 4 | 1045 | NP_001287788.1 | |
| NM_144990.3 | 4 | 1159 | NP_659427.3 | |
| XM_005270597.2 | 3 | 1898 | XP_005270654.1 | |
| XM_005270598.2 | 3 | 1214 | XP_005270655.1 | |
| XM_005270599.2 | 4 | 1222 | XP_005270656.1 | |
| XM_006710432.3 | 3 | 2309 | XP_006710495.1 | |
| XM_011540943.1 | 3 | 1845 | XP_011539245.1 | |
| XM_011540945.1 | 3 | 1782 | XP_011539247.1 | |
| XM_011540947.1 | 3 | 1307 | XP_011539249.1 | |
| XM_011540948.1 | 4 | 1760 | XP_011539250.1 | |
| XM_011540949.1 | 3 | 1690 | XP_011539251.1 | |
| XM_011540950.1 | 3 | 1660 | XP_011539252.1 | |
| XM_011540951.1 | 4 | 1214 | XP_011539253.1 | |
| XM_011540952.2 | 3 | 1637 | XP_011539254.1 | |
| XM_011540953.2 | 3 | 2217 | XP_011539255.1 | |
| XM_011540954.1 | 3 | 1568 | XP_011539256.1 | |
| XM_017000573.1 | 3 | 1898 | XP_016856062.1 | |
| XM_017000574.1 | 3 | 1718 | XP_016856063.1 | |
| AK097609.1 | 4 | 1033 | ||
| AK292296.1 | 4 | 1285 | ||
| BC022037.2 | 4 | 1121 | AAH22037.2 | |
| BC037879.1 | 2 | 1971 | AAH37879.1 | |
| BC050353.1 | 2 | 3479 | AAH50353.1 |
Target Gene Details
Entrez Gene ID: | 100507178 |
Gene Name: | SLFNL1 antisense RNA 1 |
Gene Aliases: |
- |
Location: |
Chr.1:41014590-41043890 on Build GRCh38 |
Assay Gene Location: | Within Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SLFNL1-AS1 | NR_037868.1 | 1 | 3102 | |
| AL157461.1 | 1 | 3102 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv546103 | Chr.1:41011772 - 41076832 on Build GRCh38 | Loss |
 SLFNL1
SLFNL1-AS1
CTPS1
SCMH1
|
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Additional Information:
For this assay, SNP(s) [rs74071110] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Gene Ontology Categories:
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