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See other SLCO4A1 CNV Assays ›
Gene Symbol
SLCO4A1
Assay Reference Genome
Location

Chr.20:62657164 on build GRCh38
Cytoband
20q13.33
Assay ID Hs01479065_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 28231

Gene Name:

 solute carrier organic anion transporter family member 4A1

Gene Aliases:

 OATP-E, OATP1, OATP4A1, OATPE, OATPRP1, POAT, SLC21A12

Location:

 Chr.20:62642445-62690700 on Build GRCh38

Assay Gene Location:

 Within Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLCO4A1 NM_016354.3 2 915 NP_057438.3
XM_005260203.2 2 912 XP_005260260.1
XM_011528792.2 2 912 XP_011527094.1
XM_017027826.1 2 896 XP_016883315.1
XM_017027827.1 2 912 XP_016883316.1
AB031051.1 1 801 BAA89288.1
AF104334.1 2 848 AAF15545.1
AF187817.1 1 710 AAG43447.1
AF205072.1 2 855 AAG42204.1
AK023410.1 BAB14566.1
BC015727.1 2 873 AAH15727.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422398 Chr.20:62207833 - 62674040 on Build GRCh38 Duplication SLCO4A1-AS1 OSBPL2 CABLES2 MIR133A2 LAMA5 LOC105369209 HRH3 SLCO4A1 LAMA5-AS1 RBBP8NL MIR1-1 GATA5 C20orf166-AS1 ADRM1 RPS21 MIR4758 MIR1-1HG
nsv834026 Chr.20:62636291 - 62795287 on Build GRCh38 Loss NTSR1 SLCO4A1-AS1 LOC107987285 LOC107985428 LINC00659 SLCO4A1
nsv586496 Chr.20:62332390 - 62812195 on Build GRCh38 Gain NTSR1 SLCO4A1-AS1 LOC107985428 LINC00659 CABLES2 MIR133A2 LAMA5 OGFR-AS1 SLCO4A1 LAMA5-AS1 RBBP8NL LOC107987285 MRGBP OGFR MIR1-1 GATA5 C20orf166-AS1 RPS21 MIR4758 MIR1-1HG
nsv586503 Chr.20:62645662 - 62776055 on Build GRCh38 Gain NTSR1 SLCO4A1-AS1 LOC107987285 LOC107985428 LINC00659 SLCO4A1
nsv953302 Chr.20:62345345 - 62831248 on Build GRCh38 Deletion NTSR1 SLCO4A1-AS1 LOC107985428 LINC00659 CABLES2 MIR133A2 LAMA5 OGFR-AS1 SLCO4A1 LAMA5-AS1 RBBP8NL LOC107987285 MRGBP OGFR MIR1-1 COL9A3 GATA5 C20orf166-AS1 RPS21 MIR1-1HG
nsv428380 Chr.20:62632018 - 62935383 on Build GRCh38 Loss NTSR1 SLCO4A1-AS1 LOC107985428 LINC00659 TCFL5 OGFR-AS1 SLCO4A1 LOC107987285 MRGBP OGFR COL9A3 DIDO1 DPH3P1

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