Hs01488036_cn

• Gene Symbol: LOC105371419
• Assay Reference Genome Location: Chr.16:89850399 on build GRCh38
• Cytoband: 16q24.3

Target Gene Details

• Entrez Gene ID: 105371419
• Gene Name: uncharacterized LOC105371419
• Gene Aliases: -
• Location: Chr.16:89846857-89854277 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC105371419	XM_011523522.2			XP_011521824.1

Target Gene Details

• Entrez Gene ID: 84501
• Gene Name: spire type actin nucleation factor 2
• Gene Aliases: Spir-2
• Location: Chr.16:89817477-89871319 on Build GRCh38
• Assay Gene Location: Within Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SPIRE2	NM_032451.1	3	436	NP_115827.1
	XM_011523379.1	3	1202	XP_011521681.1
	XM_011523380.2	4	458	XP_011521682.1
	XM_011523381.1	4	1282	XP_011521683.1
	XM_011523384.1	3	460	XP_011521686.1
	XM_011523385.1	3	460	XP_011521687.1
	XM_017023779.1	3	448	XP_016879268.1
	XM_017023780.1	3	613	XP_016879269.1
	XM_017023781.1			XP_016879270.1
	AB058735.1	1	534	BAB47461.1
	AJ422077.1	3	426	CAD19439.1
	AL834408.1	3	230	CAD39070.1
	BC111030.1	3	436	AAI11031.1
	BC139732.1
	BX439688.2	3	434

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv573744	Chr.16:89738447 - 89915950 on Build GRCh38	Loss	SPIRE2 FANCA LOC107984817 LOC105371419 TCF25 ZNF276
esv3639601	Chr.16:89845985 - 89862110 on Build GRCh38	Loss	SPIRE2 LOC105371419
esv2758671	Chr.16:89804324 - 89901541 on Build GRCh38	Loss	SPIRE2 FANCA LOC107984817 LOC105371419 TCF25
nsv573743	Chr.16:89664419 - 89853617 on Build GRCh38	Gain	CDK10 SPATA2L SPIRE2 VPS9D1 FANCA VPS9D1-AS1 LOC107984817 LOC105371419 SPATA33 ZNF276
esv2762221	Chr.16:89610380 - 90039318 on Build GRCh38	Gain+Loss	TUBB3 SPATA2L SPIRE2 VPS9D1 AFG3L1P FANCA GAS8-AS1 CENPBD1 VPS9D1-AS1 GAS8 DBNDD1 MC1R DEF8 TCF25 CDK10 CHMP1A LOC107984817 LOC105371419 DPEP1 SPATA33 ZNF276
nsv428331	Chr.16:89216635 - 90185980 on Build GRCh38	Gain+Loss	TUBB8P7 SPATA2L SPIRE2 VPS9D1 AFG3L1P FANCA MC1R DEF8 RPL13 ANKRD11 CDK10 CHMP1A ZNF778 LOC107984817 LOC105371419 DPEP1 SPATA33 LOC105371414 FAM157C TUBB3 SNORD68 GAS8-AS1 URAHP CENPBD1 SPG7 VPS9D1-AS1 GAS8 DBNDD1 TCF25 LOC101927817 LOC100287036 ZNF276 CPNE7 PRDM7
nsv482951	Chr.16:88633593 - 90228345 on Build GRCh38	Loss	SLC22A31 LOC339059 SPATA2L VPS9D1 AFG3L1P LOC105371409 SNAI3 CYBA LOC100129697 ANKRD11 CDK10 LOC107987238 LOC107984817 LOC105371419 DPEP1 SPATA33 TRAPPC2L FAM157C LOC101927793 TUBB3 SNORD68 IL17C URAHP VPS9D1-AS1 DBNDD1 TCF25 LOC100289580 LOC101927817 LOC400558 PABPN1L LOC100287036 MVD ZNF276 SNAI3-AS1 GALNS TUBB8P7 SPIRE2 CTU2 FANCA MC1R APRT DEF8 RPL13 CHMP1A ZNF778 CDH15 LOC105371414 ACSF3 GAS8-AS1 CENPBD1 SPG7 MIR4722 GAS8 LINC00304 RNF166 PIEZO1 CBFA2T3 CDT1 CPNE7 PRDM7

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

actin or actin-binding cytoskeletal protein

Gene Ontology Categories:

Process(es)

protein transport
vesicle-mediated transport
actin cytoskeleton organization
cleavage furrow formation
polar body extrusion after meiotic divisions
actin nucleation
intracellular transport
establishment of meiotic spindle localization
formin-nucleated actin cable assembly

Function(s)

actin binding