Hs01492584_cn

• Gene Symbol: C16orf59
• Assay Reference Genome Location: Chr.16:2462164 on build GRCh38
• Cytoband: 16p13.3

Target Gene Details

• Entrez Gene ID: 80178
• Gene Name: chromosome 16 open reading frame 59
• Gene Aliases: -
• Location: Chr.16:2460111-2464963 on Build GRCh38
• Assay Gene Location: Overlaps Intron 5 - Exon 6

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
C16orf59	NM_025108.2			NP_079384.2
	XM_011522667.1			XP_011520969.1
	AK023971.1			BAB14745.1
	AK093788.1
	AK128408.1	5	1432
	AK301929.1
	AL559561.3
	BC008882.2			AAH08882.1
	BC018719.1
	CR457319.1			CAG33600.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv827513	Chr.16:2457672 - 2462460 on Build GRCh38	Gain	C16orf59 CCNF
esv2422427	Chr.16:10001 - 2723164 on Build GRCh38	Duplication	HAGHL MIR1225 RAB11FIP3 NUBP2 HBZ MIR6767 WDR90 SOX8 MIR3177 TPSD1 LOC100287175 SNHG19 GFER MIR3180-5 TBC1D24 PDPK1 WASIR2 STUB1 SNORD60 LOC101929280 CCNF AMDHD2 LOC105371047 AXIN1 C1QTNF8 POLR3K ECI1 LOC107987233 MIR5587 METRN LOC107984876 FBXL16 C16orf59 METTL26 WFIKKN1 TSR3 MIR940 MIR3178 NME3 MIR6511B1 RHOT2 SYNGR3 SLC9A3R2 HAGH RPUSD1 PRR35 UBE2I LOC729652 SNRNP25 RPL23AP5 CASKIN1 ABCA17P LOC105371038 UNKL LOC100134368 HBA1 PRSS29P PKD1 TBL3 RGS11 LOC105371046 C16orf91 NME4 NTN3 MCRIP2 GNPTG RAB26 RPS2 CACNA1H MIR6768 DNASE1L2 FAM234A KCTD5 IFT140 TRAF7 SPSB3 NPRL3 HBA2 DDX11L10 E4F1 MIR4516 MIR3677 MRPL28 NOXO1 BRICD5 TMEM204 CAPN15 ERVK13-1 NPW SNHG9 NTHL1 PTX4 MLST8 CLCN7 ZNF598 HN1L RNF151 LINC00235 RHBDL1 RPL3L DECR2 LINC00254 ABCA3 CRAMP1 MPG TPSG1 TSC2 HS3ST6 NARFL PRSS27 MSRB1 MIR662 SNORA78 PDIA2 FAM173A ARHGDIG LOC105371049 LOC652276 PGP CCDC154 LUC7L IGFALS EME2 MIR3176 MIR6859-4 PIGQ LOC106660606 MIR4717 SNORA10 RAB40C LOC105371045 RHBDF1 FAHD1 PRR25 TPSB2 CEMP1 HBM CHTF18 TELO2 BAIAP3 TPSAB1 SSTR5 NDUFB10 MRPS34 MAPK8IP3 LMF1 JMJD8 SNORA64 LOC105371184 LMF1-AS1 CCDC78 WDR24 MSLN ATP6V0C SSTR5-AS1 TMEM8A HBQ1 RNPS1 NHLRC4 MEIOB GNG13 FLJ42627
nsv952903	Chr.16:2423400 - 2476599 on Build GRCh38	Deletion	C16orf59 NTN3 CCNF MIR6767 MIR6768 ABCA17P TBC1D24 LOC729652
nsv1052260	Chr.16:2074546 - 2629655 on Build GRCh38	Gain	LOC105371049 LOC652276 E4F1 PGP MIR4516 MIR3677 MIR1225 MIR6767 BRICD5 LOC729652 LOC106660606 SNHG19 MIR4717 CASKIN1 MIR3180-5 MLST8 ABCA17P TBC1D24 PDPK1 SNORD60 CCNF CEMP1 AMDHD2 PKD1 ABCA3 ECI1 C16orf59 NTN3 RAB26 TSC2 MIR940 ATP6V0C MIR6768 MIR3178 DNASE1L2 RNPS1 MIR6511B1 TRAF7
nsv833121	Chr.16:2360975 - 2518228 on Build GRCh38	Loss	C16orf59 NTN3 CCNF MIR6767 ATP6V0C MIR6768 ABCA17P TBC1D24 LOC729652

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding