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See other CPT1C CNV Assays ›
Gene Symbol
CPT1C
Assay Reference Genome
Location

Chr.19:49705927 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01502350_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 126129

Gene Name:

 carnitine palmitoyltransferase 1C

Gene Aliases:

 CATL1, CPT1-B, CPT1P, CPTI-B, CPTIC, SPG73

Location:

 Chr.19:49690672-49713731 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 13 - Exon 14
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
CPT1C NM_001136052.2 NP_001129524.1
NM_001199752.2 NP_001186681.1
NM_001199753.1 NP_001186682.1
NM_152359.2 NP_689572.1
NR_108072.1
XM_005258505.2 XP_005258562.1
XM_005258506.4 XP_005258563.1
XM_006723009.3 XP_006723072.1
XM_011526438.2 XP_011524740.1
XM_011526439.2 XP_011524741.1
XM_011526440.2 XP_011524742.1
XM_017026265.1 XP_016881754.1
XM_017026266.1 XP_016881755.1
XM_017026267.1 XP_016881756.1
XM_017026268.1 XP_016881757.1
XM_017026269.1 XP_016881758.1
XM_017026270.1 XP_016881759.1
XM_017026271.1 XP_016881760.1
XM_017026272.1 XP_016881761.1
XM_017026273.1 XP_016881762.1
AB208884.1 BAD92121.1
AF357970.1 AAL99615.1
AK074389.1 BAB85068.1
AK096516.1
AK289713.1
AK290092.1
AK299866.1
AK309087.1
BC029104.1 AAH29104.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469715 Chr.19:49572544 - 49730286 on Build GRCh38 Gain+Loss ADM5 SCAF1 PRR12 PRMT1 PRRG2 IRF3 RRAS BCL2L12 NOSIP CPT1C MIR5088
nsv833865 Chr.19:49572545 - 49730286 on Build GRCh38 Gain+Loss ADM5 SCAF1 PRR12 PRMT1 PRRG2 IRF3 RRAS BCL2L12 NOSIP CPT1C MIR5088
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss IRF3 SLC6A16 SNAR-C2 NTF4 KDELR1 LOC101928295 CCDC114 MIR4324 LIG1 LOC105372430 BSPH1 CCDC155 MAMSTR PTH2 SNAR-B2 CABP5 BCL2L12 RPL13A FLT3LG CGB8 TRPM4 VRK3 SNAR-A13 ADM5 PLEKHA4 PTOV1 CARD8-AS1 CD37 LOC101059948 IL4I1 NOSIP BCAT2 SNAR-A10 SNAR-A3 GRWD1 FLJ26850 HRC GYS1 SNAR-D PPP1R15A C19orf73 SPHK2 KCNJ14 SNAR-A9 SNAR-A7 MIR150 FUZ MIR6798 SNORD35B NTN5 LMTK3 MIR4749 IZUMO1 RPS11 SNAR-A4 ELSPBP1 TMEM143 PLA2G4C-AS1 FGF21 PRR12 FAM83E PRRG2 SNAR-B1 SNAR-A5 GRIN2D MIR6799 SLC17A7 DKKL1 SYNGR4 ATF5 RUVBL2 TULP2 DHDH SNAR-C3 SEC1P SNAR-C1 SNAR-A8 ALDH16A1 SNORD32A SNAR-A1 CPT1C SCAF1 LIN7B SULT2B1 HSD17B14 ZNF473 CYTH2 SNORD33 LHB DBP MIR5088 FTL PRMT1 FUT2 MIR6800 RCN3 PPFIA3 RPL18 NUCB1 KCNA7 SNAR-A14 MED25 MIR4750 TEAD2 SPACA4 CGB7 MIR4751 RASIP1 NUCB1-AS1 SNAR-A11 SNAR-C5 ZNF114 CGB3 SNAR-G2 C19orf68 SIGLEC16 EMP3 PLA2G4C FUT1 SNAR-A12 SNAR-C4 AKT1S1 FCGRT LOC105447645 SIGLEC11 AP2A1 BAX LOC100287477 TBC1D17 RRAS SNORD35A TSKS CA11 CGB5 SNAR-A6 SNRNP70 PIH1D1 PTOV1-AS1 PNKP SNAR-A2 GFY PTOV1-AS2 SNAR-G1 SNORD34 CGB1 CGB2 NUP62 CARD8
nsv817854 Chr.19:49618821 - 49726387 on Build GRCh38 Gain ADM5 SCAF1 PRR12 PRMT1 IRF3 RRAS BCL2L12 CPT1C MIR5088
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion IRF3 CPT1C SCAF1 AKT1S1 FUZ MIR5088 PRMT1 AP2A1 MIR6800 MIR4749 TBC1D17 RRAS BCL2L12 TSKS MED25 MIR4750 ADM5 PRR12 PTOV1 PTOV1-AS1 PNKP PRRG2 MIR6799 IL4I1 MIR4751 NOSIP ATF5 PTOV1-AS2 NUP62
nsv833864 Chr.19:49551790 - 49733819 on Build GRCh38 Gain ADM5 SCAF1 PRR12 PRMT1 PRRG2 IRF3 RRAS BCL2L12 NOSIP CPT1C MIR5088
nsv1160655 Chr.19:49489110 - 49841830 on Build GRCh38 Deletion IRF3 SNORD32A CPT1C SCAF1 MIR150 FUZ SNORD33 FCGRT MIR5088 SNORD35B PRMT1 AP2A1 MIR6800 RCN3 RRAS BCL2L12 SNORD35A RPL13A RPS11 TSKS MED25 ADM5 PRR12 PTOV1-AS1 PRRG2 MIR6799 NOSIP SNORD34

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

acyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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