Hs01502652_cn

• Gene Symbol: LRCH4
• Assay Reference Genome Location: Chr.7:100574059 on build GRCh38
• Cytoband: 7q22.1

Target Gene Details

• Entrez Gene ID: 4034
• Gene Name: leucine rich repeats and calponin homology domain containing 4
• Gene Aliases: LRN, LRRN1, LRRN4, PP14183
• Location: Chr.7:100574011-100586188 on Build GRCh38
• Assay Gene Location: Within Exon 18

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LRCH4	NM_001289934.1	18	2240	NP_001276863.1
	NM_002319.4	18	3188	NP_002310.2
	AI491709.1	1	68
	BC007634.1	17	2792	AAH07634.1

Target Gene Details

• Entrez Gene ID: 101927655
• Gene Name: ZO-2 associated speckle protein
• Gene Aliases: -
• Location: Chr.7:100574035-100574733 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZASP	NM_001289933.1			NP_001276862.1
	FR717257.1
	HQ401361.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2734888	Chr.7:99975623 - 101290285 on Build GRCh38	Deletion	STAG3L5P GIGYF1 NYAP1 PILRA AP1S1 SAP25 STAG3L5P-PVRIG2P-PILRB ZNF3 PVRIG MIR6875 MUC3A ZCWPW1 PMS2P1 LRCH4 SPDYE3 GPC2 ZNHIT1 LAMTOR4 GNB2 AZGP1P1 NAT16 MUC17 PILRB VGF GAL3ST4 AGFG2 EPHB4 PLOD3 EPO LOC102724094 ZAN TRIP6 TFR2 COPS6 CLDN15 MIR25 POP7 C7orf43 MIR4653 LOC105375429 AP4M1 ZKSCAN1 ACHE C7orf61 MIR4658 SLC12A9 SERPINE1 ZASP TAF6 MOGAT3 MEPCE MIR93 TSC22D4 MIR106B PVRIG2P ACTL6B STAG3 PPP1R35 PCOLCE-AS1 FBXO24 MCM7 MBLAC1 CNPY4 PCOLCE ZSCAN21 UFSP1 GATS MUC12 MIR6840 MOSPD3 TRIM56 SRRT AZGP1 FIS1
nsv951386	Chr.7:100566478 - 100682977 on Build GRCh38	Deletion	GIGYF1 GNB2 LOC105375429 ACTL6B SAP25 PCOLCE-AS1 AGFG2 FBXO24 ZASP PCOLCE MOSPD3 LRCH4 TFR2
nsv831072	Chr.7:100564880 - 100765212 on Build GRCh38	Loss	GIGYF1 GNB2 LOC105375429 ACTL6B SAP25 PCOLCE-AS1 AGFG2 FBXO24 ZASP PCOLCE EPO ZAN MOSPD3 LRCH4 TFR2 POP7
nsv5868	Chr.7:100572375 - 100617023 on Build GRCh38	Deletion	FBXO24 ZASP PCOLCE MOSPD3 LRCH4 SAP25 PCOLCE-AS1

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

nervous system development

Function(s)

protein binding