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See other NPDC1 CNV Assays ›
Gene Symbol
NPDC1
Assay Reference Genome
Location

Chr.9:137041020 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01505832_cn
Size
Availability Made To Order
Catalog # 4400291
Price 4,505.00
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4505.0
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Assay Details

Target Gene Details

Entrez Gene ID:

 56654

Gene Name:

 neural proliferation, differentiation and control 1

Gene Aliases:

 CAB, CAB-, CAB-1, CAB1, NPDC-1

Location:

 Chr.9:137039457-137046224 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NPDC1 NM_015392.3 NP_056207.3
AF272357.1 AAF76225.1
AF283247.1 AAF82603.1
AF285836.1 AAK27328.1
AF327349.1 AAL56010.1
AK054950.1
AK074793.1 BAC11212.1
AK225091.1
BC004217.2 AAH04217.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss LOC101930307 MIR3621 SAPCD2 DPP7 MAN1B1 GRIN1 PRR31 MAN1B1-AS1 CLIC3 ENTPD2 ABCA2 PTGDS FUT7 LCNL1 C9orf139 TMEM210 NPDC1 C9orf142 UAP1L1 LRRC26
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss LOC101930307 RNF208 GRIN1 RNF224 TOR4A PHPT1 RABL6 NDOR1 UAP1L1 NSMF FAM166A NOXA1 EDF1 SLC34A3 MAN1B1-AS1 ENTPD2 ABCA2 LCNL1 C9orf139 TMEM210 C9orf142 SSNA1 MIR7114 LRRC26 ANAPC2 TRAF2 MIR3621 DPP7 FBXW5 TPRN PRR31 CCDC183-AS1 LCN12 CLIC3 MIR4479 MAMDC4 TMEM203 TUBB4B NRARP C9orf172 CYSRT1 SAPCD2 CCDC183 MAN1B1 C9orf173-AS1 C8G STPG3 PNPLA7 ENTPD8 PTGDS FUT7 NPDC1 EXD3 MIR4292 NELFB
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion LOC101930307 SAPCD2 DPP7 MAN1B1 PRR31 MAN1B1-AS1 LCN12 CLIC3 ENTPD2 ABCA2 C8G PTGDS FUT7 LCNL1 C9orf139 NPDC1 C9orf142 UAP1L1
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss DNLZ NOTCH1 LOC101930307 GRIN1 LCN8 TMEM141 PHPT1 PMPCA LINC01451 RABL6 SEC16A UAP1L1 MIR126 LOC100128593 INPP5E SNHG7 EDF1 C9orf163 MAN1B1-AS1 CARD9 ENTPD2 ABCA2 NALT1 SNORA17B LCNL1 C9orf139 TMEM210 C9orf142 MIR6722 LRRC26 TRAF2 SNAPC4 SNORA17A MIR3621 DPP7 FBXW5 PRR31 CCDC183-AS1 LCN12 CLIC3 FAM69B MIR4479 LCN15 MAMDC4 MIR4673 C9orf172 SAPCD2 AGPAT2 CCDC183 MIR4674 MAN1B1 C8G SDCCAG3 EGFL7 PTGDS FUT7 LCN6 NPDC1 LCN10 MIR4292 HSPC324
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss LOC101930307 MIR3621 SAPCD2 DPP7 MAN1B1 GRIN1 MAN1B1-AS1 ENTPD2 C9orf139 TMEM210 NPDC1 UAP1L1 LRRC26
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain LOC101930307 MIR3621 SAPCD2 DPP7 MAN1B1 GRIN1 MAN1B1-AS1 ENTPD2 FUT7 C9orf139 TMEM210 NPDC1 SSNA1 UAP1L1 LRRC26 ANAPC2
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss FUT7 C9orf139 NPDC1 ENTPD2 ABCA2
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion LOC101930307 RNF208 GRIN1 RNF224 LCN8 TMEM141 TOR4A PHPT1 LINC01451 RABL6 NDOR1 UAP1L1 MIR126 LOC100128593 FAM166A SNHG7 EDF1 SLC34A3 MAN1B1-AS1 ENTPD2 ABCA2 SNORA17B LCNL1 C9orf139 TMEM210 C9orf142 SSNA1 MIR6722 LRRC26 ANAPC2 TRAF2 SNORA17A MIR3621 DPP7 FBXW5 TPRN PRR31 CCDC183-AS1 LCN12 CLIC3 FAM69B MIR4479 LCN15 MAMDC4 TMEM203 TUBB4B NRARP C9orf172 CYSRT1 SAPCD2 AGPAT2 CCDC183 MAN1B1 C9orf173-AS1 C8G STPG3 EGFL7 PTGDS FUT7 LCN6 NPDC1 LCN10 EXD3 MIR4292 NELFB HSPC324

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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