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See other ATF5 CNV Assays ›
Gene Symbol
ATF5
Assay Reference Genome
Location

Chr.19:49932998 on build GRCh38
Cytoband
19q13.33
Assay ID Hs01506767_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 22809

Gene Name:

 activating transcription factor 5

Gene Aliases:

 ATFX, HMFN0395

Location:

 Chr.19:49928702-49933936 on Build GRCh38

Assay Gene Location:

 Within Exon 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATF5 NM_001193646.1 3 1132 NP_001180575.1
NM_001290746.1 3 1103 NP_001277675.1
NM_012068.5 4 1337 NP_036200.2
XM_011526629.2 3 1039 XP_011524931.1
AB021663.2 3 1074 BAA78477.2
AB073613.1 3 1070 BAD38650.1
AF305687.1 2 805 AAG22558.1
AK024402.1 3 1074
AK091985.1 2 1046
AK290592.1 4 1276
BC005174.2 3 1061 AAH05174.1
BM462249.1

Target Gene Details

Entrez Gene ID:

 100616483

Gene Name:

 microRNA 4751

Gene Aliases:

 -

Location:

 Chr.19:49933064-49933137 on Build GRCh38

Assay Gene Location:

 Overlaps - Exon 1
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
MIR4751 NR_039906.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv9739 Chr.19:47901840 - 50143063 on Build GRCh38 Gain+Loss AKT1S1 SLC17A7 SNAR-A14 TMEM143 SNAR-A1 LIG1 KCNA7 SNAR-A12 SNAR-A4 PTOV1 BCL2L12 SIGLEC16 TBC1D17 FTL FUT1 SNAR-A11 ELSPBP1 PLA2G4C NUCB1 CCDC155 LIN7B MIR6799 SNRNP70 EMP3 LHB PIH1D1 CGB8 SNAR-A7 CGB7 SPHK2 PTH2 SNAR-B1 LOC101928295 KDELR1 IL4I1 PRRG2 CARD8-AS1 SNAR-C5 ZNF114 SNAR-A10 RCN3 NTN5 SNAR-A2 PLEKHA4 SNAR-C1 ZNF473 SNAR-A13 FUZ MED25 PLA2G4C-AS1 SNAR-A9 LOC105447645 CGB2 PTOV1-AS1 SCAF1 ALDH16A1 SNAR-B2 MIR4749 SNORD35A SNAR-A5 MIR5088 RASIP1 KCNJ14 SNAR-G1 IZUMO1 C19orf73 SNAR-C2 GRWD1 RUVBL2 CARD8 FCGRT RPL18 MAMSTR SNAR-C4 SPACA4 PRMT1 C19orf68 SNORD35B IRF3 FGF21 PNKP HRC SNAR-A3 CPT1C TSKS SULT2B1 PTOV1-AS2 CA11 FLT3LG DBP LOC105372430 SEC1P BSPH1 SNORD34 SNAR-D CGB5 BAX GFY NTF4 NOSIP LOC101059948 BCAT2 RPS11 MIR6800 LMTK3 SNAR-G2 MIR4750 PPP1R15A MIR4324 FLJ26850 NUCB1-AS1 SNAR-A8 SNAR-A6 FAM83E TRPM4 DKKL1 GYS1 PPFIA3 RPL13A TEAD2 CYTH2 CD37 CGB1 CABP5 GRIN2D HSD17B14 MIR6798 SNORD33 LOC100287477 ADM5 RRAS CGB3 AP2A1 CCDC114 PRR12 NUP62 VRK3 DHDH SNAR-C3 SLC6A16 SYNGR4 ATF5 SIGLEC11 MIR150 MIR4751 SNORD32A TULP2 FUT2
nsv1065648 Chr.19:49924738 - 50001154 on Build GRCh38 Gain SIGLEC16 NUP62 VRK3 ATF5 SIGLEC11 IL4I1 MIR4751
dgv53n68 Chr.19:49724393 - 49943224 on Build GRCh38 Loss MIR4749 AKT1S1 AP2A1 MIR6799 PNKP FUZ PTOV1 MED25 NUP62 TBC1D17 TSKS MIR6800 PTOV1-AS2 ATF5 MIR4750 IL4I1 PTOV1-AS1 MIR4751
nsv953600 Chr.19:49555044 - 49938043 on Build GRCh38 Deletion AKT1S1 IRF3 PNKP FUZ PTOV1 MED25 BCL2L12 CPT1C TBC1D17 TSKS PTOV1-AS2 PTOV1-AS1 SCAF1 ADM5 RRAS MIR4749 AP2A1 MIR6799 MIR5088 PRR12 NOSIP NUP62 MIR6800 ATF5 MIR4750 IL4I1 MIR4751 PRRG2 PRMT1
nsv579910 Chr.19:49915478 - 49957657 on Build GRCh38 Gain NUP62 ATF5 SIGLEC11 IL4I1 MIR4751
esv3644630 Chr.19:49877826 - 50039767 on Build GRCh38 Gain AKT1S1 SIGLEC16 NUP62 TBC1D17 VRK3 ATF5 SIGLEC11 MIR4750 IL4I1 ZNF473 MIR4751
dgv54n68 Chr.19:49848512 - 50008788 on Build GRCh38 Loss MIR4749 AKT1S1 PNKP PTOV1 SIGLEC16 NUP62 TBC1D17 VRK3 PTOV1-AS2 ATF5 SIGLEC11 MIR4750 IL4I1 PTOV1-AS1 MIR4751
nsv1058623 Chr.19:49918762 - 49966847 on Build GRCh38 Gain NUP62 ATF5 SIGLEC11 IL4I1 MIR4751
nsv579911 Chr.19:49930731 - 49969159 on Build GRCh38 Gain ATF5 SIGLEC11 MIR4751

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