Genomic Map
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Target Gene Details
Entrez Gene ID: | 1026 |
Gene Name: | cyclin dependent kinase inhibitor 1A |
Gene Aliases: |
CAP20, CDKN1, CIP1, MDA-6, P21, SDI1, WAF1, p21CIP1 |
Location: |
Chr.6:36676460-36687339 on Build GRCh38 |
Assay Gene Location: | Within Exon 6 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CDKN1A | NM_000389.4 | 3 | 2058 | NP_000380.1 |
| NM_001220777.1 | 3 | 2003 | NP_001207706.1 | |
| NM_001220778.1 | 3 | 2168 | NP_001207707.1 | |
| NM_001291549.1 | 4 | 2210 | NP_001278478.1 | |
| NM_078467.2 | 4 | 2005 | NP_510867.1 | |
| AA534613.1 | 1 | 117 | ||
| AB209881.1 | 3 | 2015 | BAD93118.1 | |
| AI973138.1 | 1 | 116 | ||
| BC000275.1 | 3 | 1998 | AAH00275.1 | |
| BC000312.2 | 3 | 2152 | AAH00312.1 | |
| BC001935.1 | 3 | 2013 | AAH01935.1 | |
| BC013967.2 | 3 | 2016 | AAH13967.1 | |
| BQ941282.1 | 1 | 603 | ||
| L25610.1 | 3 | 2011 | AAA16109.1 | |
| L26165.1 | 3 | 2011 | AAA19811.1 | |
| U03106.1 | 3 | 2008 | AAC04313.1 | |
| U09579.1 | 3 | 2027 | AAA85641.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1015689 | Chr.6:36550916 - 39052434 on Build GRCh38 | Gain |
 CPNE5
DNAH8
MTCH1
CMTR1
MIR3925
LOC107986531
MIR4462
TBC1D22B
PIM1
PI16
RNF8
FGD2
C6orf89
LOC100131047
RAB44
PPIL1
GLP1R
TMEM217
SRSF3
GLO1
LOC100505530
ZFAND3
BTBD9
PANDAR
MDGA1
CDKN1A
CCDC167
|
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Additional Information:
For this assay, SNP(s) [rs73730143] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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