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Gene Symbol
JMJD8
Assay Reference Genome
Location

Chr.16:683867 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01557679_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 339123

Gene Name:

 jumonji domain containing 8

Gene Aliases:

 C16orf20, PP14397

Location:

 Chr.16:681666-684446 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 3 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
JMJD8 NM_001005920.2 NP_001005920.2
NM_001323918.1 NP_001310847.1
NM_001323919.1 NP_001310848.1
NM_001323920.1 NP_001310849.1
NM_001323922.1 NP_001310851.1
NR_136650.1
NR_136651.1
NR_136652.1
AF370420.1 AAQ15256.1
AL524336.3
AL524922.3
BC073785.1 AAH73785.1
BC137100.1
BC137101.1
BG481039.1
BG826580.1
BI463867.1
BI767435.1
BX335015.2
CD674105.1
DQ074695.1 AAY82251.1
HY023676.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv827480 Chr.16:672775 - 685288 on Build GRCh38 Gain STUB1 WDR24 JMJD8 LOC105371184 RHOT2 RHBDL1
nsv482182 Chr.16:681667 - 684439 on Build GRCh38 Gain STUB1 JMJD8
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication WDR24 LOC107984876 MIR6859-4 PIGQ SNORD60 MCRIP2 RNPS1 NPRL3 GNG13 RHBDL1 MLST8 CCDC78 MIR4516 TMEM204 LINC00254 NDUFB10 SSTR5-AS1 PRR35 SOX8 WASIR2 PKD1 MAPK8IP3 C1QTNF8 TPSB2 TPSD1 MIR940 E4F1 SYNGR3 RHOT2 CCNF LOC107987233 HBA1 TBL3 SNRNP25 METTL26 MIR3180-5 DNASE1L2 FAHD1 MRPL28 GFER MIR3677 WFIKKN1 LOC105371047 RHBDF1 CASKIN1 SLC9A3R2 CAPN15 LOC729652 WDR90 EME2 TBC1D24 LMF1 UNKL MIR3177 RPUSD1 ABCA3 PDIA2 RGS11 ABCA17P LOC100134368 TELO2 MSLN ATP6V0C RNF151 FBXL16 TPSG1 HAGHL MEIOB AMDHD2 LOC105371045 IFT140 SPSB3 AXIN1 DDX11L10 CHTF18 MIR3176 FAM173A MIR5587 DECR2 TSC2 MIR3178 LUC7L GNPTG MIR6767 TMEM8A TPSAB1 NME3 PRSS29P RAB40C MIR1225 LOC105371049 LMF1-AS1 LOC105371038 NTHL1 FAM234A CACNA1H NME4 TRAF7 NARFL LOC106660606 SNORA10 MIR662 UBE2I MSRB1 MIR6511B1 LOC101929280 STUB1 ERVK13-1 NPW METRN PDPK1 IGFALS HN1L PGP CCDC154 RPS2 CLCN7 LINC00235 RAB11FIP3 PRSS27 CEMP1 NTN3 MIR4717 MIR6768 C16orf91 HBZ BAIAP3 BRICD5 HAGH LOC652276 FLJ42627 NHLRC4 LOC105371046 SNORA64 RPL23AP5 TSR3 C16orf59 MPG ECI1 PTX4 LOC105371184 HBQ1 ARHGDIG ZNF598 HS3ST6 PRR25 SNHG9 RAB26 LOC100287175 HBA2 RPL3L MRPS34 SNORA78 NOXO1 SNHG19 NUBP2 SSTR5 HBM JMJD8 KCTD5 CRAMP1 POLR3K
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss RAB40C WDR24 CAPN15 PIGQ WDR90 MCRIP2 LOC105371038 NHLRC4 RPUSD1 GNG13 RHBDL1 NARFL CCDC78 LOC105371184 MIR662 MSLN PRR25 PRR35 FBXL16 LOC101929280 STUB1 LOC100287175 HAGHL METRN RHOT2 LOC107987233 CHTF18 MIR3176 FAM173A MIR5587 METTL26 JMJD8 LINC00235 RAB11FIP3 WFIKKN1
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss FAM173A STUB1 WDR24 NARFL CCDC78 JMJD8 HAGHL METRN MSLN FBXL16
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss RAB40C WDR24 CAPN15 PIGQ WDR90 MCRIP2 LOC105371038 NHLRC4 RPUSD1 GNG13 RHBDL1 NARFL CCDC78 LOC105371184 MIR662 MSLN PRR25 PRR35 FBXL16 LOC101929280 STUB1 LOC100287175 HAGHL METRN RHOT2 LOC107987233 CHTF18 MIR3176 FAM173A MIR5587 METTL26 JMJD8 LINC00235 RAB11FIP3 WFIKKN1
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion RAB40C WDR24 CAPN15 LOC107984876 PIGQ LMF1-AS1 WDR90 MCRIP2 LOC105371038 NHLRC4 LMF1 RPUSD1 GNG13 RHBDL1 NARFL CCDC78 LOC105371184 MIR662 MSLN SSTR5-AS1 PRR25 PRR35 SOX8 FBXL16 LOC101929280 STUB1 C1QTNF8 LOC100287175 HAGHL METRN RHOT2 LOC107987233 CHTF18 SSTR5 MIR3176 FAM173A MIR5587 METTL26 JMJD8 LINC00235 RAB11FIP3 WFIKKN1
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss LOC101929280 RAB40C STUB1 WDR24 LOC100287175 PIGQ HAGHL WDR90 MCRIP2 METRN LOC105371038 RHOT2 RHBDL1 FAM173A NARFL CCDC78 METTL26 JMJD8 LOC105371184 WFIKKN1 FBXL16
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication RAB40C WDR24 PIGQ WDR90 MCRIP2 LOC105371038 RPUSD1 GNG13 RHBDL1 NARFL CCDC78 LOC105371184 MIR662 MSLN FBXL16 LOC101929280 STUB1 LOC100287175 HAGHL METRN RHOT2 CHTF18 FAM173A METTL26 JMJD8 WFIKKN1
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication RAB40C WDR24 CAPN15 PIGQ WDR90 MCRIP2 LOC105371038 NHLRC4 RPUSD1 GNG13 RHBDL1 NARFL CCDC78 LOC105371184 MIR662 MSLN PRR25 PRR35 FBXL16 LOC101929280 STUB1 LOC100287175 HAGHL METRN RHOT2 LOC107987233 CHTF18 MIR3176 FAM173A MIR5587 METTL26 JMJD8 LINC00235 RAB11FIP3 WFIKKN1
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss RAB40C STUB1 WDR24 LOC100287175 HAGHL WDR90 MCRIP2 METRN LOC105371038 RHOT2 RHBDL1 FAM173A NARFL CCDC78 METTL26 JMJD8 LOC105371184 WFIKKN1 FBXL16
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain STUB1 WDR24 LOC100287175 HAGHL WDR90 MCRIP2 METRN LOC105371038 RHOT2 RHBDL1 FAM173A NARFL CCDC78 METTL26 JMJD8 LOC105371184 WFIKKN1 FBXL16
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss STUB1 WDR24 HAGHL WDR90 METRN RHOT2 RHBDL1 FAM173A NARFL CCDC78 JMJD8 LOC105371184 MSLN FBXL16
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss STUB1 WDR24 LOC100287175 HAGHL WDR90 MCRIP2 METRN LOC105371038 RHOT2 RPUSD1 CHTF18 GNG13 RHBDL1 FAM173A NARFL CCDC78 JMJD8 LOC105371184 MIR662 MSLN FBXL16

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

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