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Gene Symbol
JMJD8
Assay Reference Genome
Location

Chr.16:683585 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01561923_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 339123

Gene Name:

 jumonji domain containing 8

Gene Aliases:

 C16orf20, PP14397

Location:

 Chr.16:681666-684446 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 4 - Exon 5
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
JMJD8 NM_001005920.2 NP_001005920.2
NM_001323918.1 NP_001310847.1
NM_001323919.1 NP_001310848.1
NM_001323920.1 NP_001310849.1
NM_001323922.1 NP_001310851.1
NR_136650.1
NR_136651.1
NR_136652.1
AF370420.1 AAQ15256.1
AL524336.3
AL524922.3
BC073785.1 AAH73785.1
BC094850.1 AAH94850.1
BC137100.1
BC137101.1
BG423721.1
BG481039.1
BG826580.1
BI463867.1
BI767435.1
BX335015.2
CD674105.1
CN371155.1
DQ074695.1 AAY82251.1
DQ597753.1
HY023676.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv827480 Chr.16:672775 - 685288 on Build GRCh38 Gain STUB1 JMJD8 LOC105371184 RHBDL1 WDR24 RHOT2
nsv482182 Chr.16:681667 - 684439 on Build GRCh38 Gain STUB1 JMJD8
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication MIR1225 RPL23AP5 CRAMP1 RPS2 PRSS29P LMF1 UNKL ZNF598 TPSG1 RPUSD1 MIR3178 LUC7L MIR6859-4 LOC100134368 HBA2 NOXO1 GFER FAHD1 LOC106660606 RGS11 HN1L SNORA78 MIR4717 NME3 PRR35 SSTR5-AS1 IGFALS DNASE1L2 TELO2 CAPN15 AMDHD2 MIR662 EME2 MIR3677 MSLN MEIOB NTN3 LOC105371046 PRR25 LOC100287175 MRPL28 PGP MPG NDUFB10 SOX8 CASKIN1 RHOT2 ERVK13-1 RHBDF1 NPW NHLRC4 LOC107987233 RAB26 JMJD8 NPRL3 GNPTG LOC105371045 MIR4516 TBL3 LMF1-AS1 UBE2I MAPK8IP3 TRAF7 E4F1 POLR3K MCRIP2 LOC105371184 PDPK1 WDR90 CCDC78 DECR2 TSC2 SNHG9 PKD1 PTX4 STUB1 NARFL MIR3176 SLC9A3R2 HBZ RPL3L RAB40C MIR5587 METTL26 LINC00254 KCTD5 LOC107984876 RAB11FIP3 HBA1 MIR6511B1 CEMP1 C16orf91 CHTF18 HBQ1 CACNA1H FLJ42627 NUBP2 MSRB1 MIR3180-5 SPSB3 CLCN7 TMEM8A SNORA64 ARHGDIG SSTR5 PRSS27 LINC00235 RNPS1 MIR3177 TPSD1 HS3ST6 RHBDL1 HBM SNORA10 PIGQ LOC105371049 TPSAB1 ABCA17P CCDC154 WFIKKN1 WASIR2 TBC1D24 SNHG19 HAGH NME4 ATP6V0C PDIA2 METRN RNF151 SNORD60 C1QTNF8 MIR940 LOC105371047 SYNGR3 FAM234A IFT140 FAM173A SNRNP25 HAGHL MIR6768 TMEM204 TSR3 DDX11L10 MRPS34 LOC729652 BRICD5 LOC101929280 C16orf59 LOC105371038 GNG13 ABCA3 AXIN1 NTHL1 MIR6767 CCNF FBXL16 WDR24 TPSB2 BAIAP3 MLST8 LOC652276 ECI1
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss PRR25 RAB11FIP3 LOC100287175 CHTF18 RPUSD1 RHOT2 METRN NHLRC4 LOC107987233 JMJD8 FAM173A HAGHL MCRIP2 LINC00235 LOC105371184 RHBDL1 PIGQ PRR35 WDR90 CCDC78 LOC101929280 CAPN15 LOC105371038 STUB1 GNG13 MIR662 WFIKKN1 NARFL MIR3176 FBXL16 MSLN WDR24 RAB40C MIR5587 METTL26
nsv457311 Chr.16:681725 - 761746 on Build GRCh38 Loss HAGHL STUB1 JMJD8 NARFL FBXL16 MSLN WDR24 CCDC78 FAM173A METRN
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss PRR25 RAB11FIP3 LOC100287175 CHTF18 RPUSD1 RHOT2 METRN NHLRC4 LOC107987233 JMJD8 FAM173A HAGHL MCRIP2 LINC00235 LOC105371184 RHBDL1 PIGQ PRR35 WDR90 CCDC78 LOC101929280 CAPN15 LOC105371038 STUB1 GNG13 MIR662 WFIKKN1 NARFL MIR3176 FBXL16 MSLN WDR24 RAB40C MIR5587 METTL26
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion LOC107984876 PRR25 RAB11FIP3 LOC100287175 SOX8 LMF1 CHTF18 RPUSD1 RHOT2 METRN NHLRC4 LOC107987233 C1QTNF8 JMJD8 LMF1-AS1 FAM173A HAGHL MCRIP2 SSTR5 LINC00235 LOC105371184 RHBDL1 PIGQ PRR35 WDR90 SSTR5-AS1 CCDC78 LOC101929280 CAPN15 LOC105371038 STUB1 GNG13 MIR662 WFIKKN1 NARFL MIR3176 FBXL16 MSLN WDR24 RAB40C MIR5587 METTL26
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss HAGHL MCRIP2 LOC100287175 LOC105371184 RHBDL1 PIGQ WDR90 CCDC78 RHOT2 LOC101929280 METRN LOC105371038 STUB1 JMJD8 WFIKKN1 NARFL FBXL16 WDR24 RAB40C METTL26 FAM173A
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication LOC100287175 CHTF18 RPUSD1 RHOT2 METRN JMJD8 FAM173A HAGHL MCRIP2 LOC105371184 RHBDL1 PIGQ WDR90 CCDC78 LOC101929280 LOC105371038 STUB1 GNG13 MIR662 WFIKKN1 NARFL FBXL16 MSLN WDR24 RAB40C METTL26
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication PRR25 RAB11FIP3 LOC100287175 CHTF18 RPUSD1 RHOT2 METRN NHLRC4 LOC107987233 JMJD8 FAM173A HAGHL MCRIP2 LINC00235 LOC105371184 RHBDL1 PIGQ PRR35 WDR90 CCDC78 LOC101929280 CAPN15 LOC105371038 STUB1 GNG13 MIR662 WFIKKN1 NARFL MIR3176 FBXL16 MSLN WDR24 RAB40C MIR5587 METTL26
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss HAGHL MCRIP2 LOC100287175 LOC105371184 RHBDL1 WDR90 CCDC78 RHOT2 METRN LOC105371038 STUB1 JMJD8 WFIKKN1 NARFL FBXL16 WDR24 RAB40C METTL26 FAM173A
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain HAGHL MCRIP2 LOC100287175 LOC105371184 RHBDL1 WDR90 CCDC78 RHOT2 METRN LOC105371038 STUB1 JMJD8 WFIKKN1 NARFL FBXL16 WDR24 METTL26 FAM173A
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss HAGHL LOC105371184 RHBDL1 WDR90 CCDC78 RHOT2 METRN STUB1 JMJD8 NARFL FBXL16 MSLN WDR24 FAM173A
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss HAGHL MCRIP2 LOC100287175 LOC105371184 RHBDL1 WDR90 CCDC78 CHTF18 RPUSD1 RHOT2 METRN LOC105371038 STUB1 GNG13 JMJD8 MIR662 NARFL FBXL16 MSLN WDR24 FAM173A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

protein modifying enzyme

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