accessibility menu, dialog, popup

UserName
Viewing profile as user:

Please enter the information below and press OK to send your cart to Core Services for purchase.

    

System Message

OKCancel
LOADING ...
See other LSM2 CNV Assays ›
Gene Symbol
LSM2
Assay Reference Genome
Location

Chr.6:31806099 on build GRCh38
Cytoband
6p21.33
Assay ID Hs01584919_cn
Size
Availability Made To Order
Catalog # 4400291
Price
Your Price
Online offer:
Check your price ›

Assay Details

Target Gene Details

Entrez Gene ID:

 57819

Gene Name:

 LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated

Gene Aliases:

 C6orf28, G7B, YBL026W, snRNP

Location:

 Chr.6:31797392-31806984 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LSM2 NM_021177.4 NP_067000.1
AF136977.1 AAG49438.1
AF182288.1 AAD56226.1
AF196468.1 AAG33023.1
AJ245416.1 CAB52190.1
BC009192.2 AAH09192.1
BP203102.1
BU189898.1
CR542146.1 CAG46943.1
CR542157.1 CAG46954.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1126749 Chr.6:31457323 - 32594423 on Build GRCh38 Deletion LOC100287329 NELFE HSPA1A C6orf25 MSH5-SAPCD1 VWA7 LY6G5C APOM LOC101929163 BAG6 MICB HSPA1B HSPA1L C2-AS1 LSM2 DXO FKBPL AGPAT1 ZBTB12 HCG26 TNXA SNORD117 EGFL8 LY6G6E SNORD84 BTNL2 LOC102725068 CYP21A2 SNORD52 LTA MIR4646 C4B LY6G6D RNF5 ATP6V1G2-DDX39B HLA-DRB6 MCCD1 GPSM3 CFB ABHD16A LOC100507547 LTB PPT2-EGFL8 SAPCD1 TNF LST1 NFKBIL1 LY6G6F NOTCH4 NCR3 GPANK1 EHMT2 MIR6721 HLA-DRB1 PPT2 C4A SNORA38 C6orf48 CLIC1 ATP6V1G2 DDX39B HLA-DRA C2 PRRC2A CSNK2B SKIV2L DDX39B-AS1 MSH5 STK19 VARS DDAH2 AIF1 CYP21A1P NEU1 HLA-DRB5 SLC44A4 LY6G6C C6orf47 TNXB SNORD48 LY6G5B AGER MIR6833 ATF6B HCG23 HCP5 PRRT1 MIR6832 MIR1236 C6orf10 PBX2 SAPCD1-AS1
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion LOC100287329 HSPA1A COL11A2 C6orf25 LY6G5C APOM BAG6 BRD2 MICB C2-AS1 LSM2 DXO HLA-DQA2 ZBTB12 TNXA HLA-DQB1-AS1 EGFL8 LY6G6E SNORD84 BTNL2 SNORD52 LTA MIR4646 RPS18 LY6G6D RNF5 ATP6V1G2-DDX39B HLA-DRB6 GPSM3 ZBTB22 KIFC1 CFB ABHD16A PSMB9 HLA-DMA MIR219A1 LTB HLA-DQB2 PPT2-EGFL8 TNF NOTCH4 NCR3 TAP2 PPT2 TAP1 SNORA38 C6orf48 CLIC1 ATP6V1G2 RING1 DDX39B HLA-DRA PRRC2A CSNK2B SKIV2L DDX39B-AS1 VPS52 MSH5 MIR6834 PFDN6 STK19 DDAH2 HLA-DMB AIF1 ZBTB9 NEU1 LY6G6C SNORD48 MIR6873 AGER MIR6833 SYNGAP1 HLA-DPA1 ATF6B HCG23 HCG24 HCP5 MIR6832 C6orf10 DAXX LOC100294145 NELFE MIR3135B HCG25 MSH5-SAPCD1 VWA7 LOC101929163 HSPA1B HSPA1L FKBPL AGPAT1 HLA-DOB HCG26 B3GALT4 SNORD117 CUTA HLA-DQB1 LOC102725068 CYP21A2 MIR5004 C4B MCCD1 LOC100507547 SAPCD1 LST1 NFKBIL1 LY6G6F GPANK1 EHMT2 MIR6721 HLA-DRB1 C4A WDR46 PSMB8-AS1 C2 SLC39A7 HLA-DPB1 HSD17B8 VARS PHF1 RXRB CYP21A1P TAPBP HLA-DRB5 SLC44A4 HLA-DQA1 C6orf47 TNXB PSMB8 HLA-DPB2 RGL2 LY6G5B HLA-DOA PPP1R2P1 PRRT1 MIR1236 PBX2 SAPCD1-AS1
dgv10403n54 Chr.6:31312324 - 32049763 on Build GRCh38 Loss LOC100287329 NELFE HSPA1A C6orf25 MSH5-SAPCD1 VWA7 LY6G5C APOM BAG6 MICB HSPA1B HSPA1L C2-AS1 LSM2 DXO ZBTB12 HCG26 TNXA SNORD117 LY6G6E MICA SNORD84 LOC102725068 CYP21A2 SNORD52 LTA MIR4646 C4B LY6G6D ATP6V1G2-DDX39B MCCD1 CFB ABHD16A LTB HLA-B MIR6891 SAPCD1 TNF LST1 NFKBIL1 LY6G6F NCR3 GPANK1 EHMT2 C4A SNORA38 C6orf48 CLIC1 ATP6V1G2 DDX39B C2 PRRC2A CSNK2B SKIV2L DDX39B-AS1 MSH5 STK19 VARS DDAH2 AIF1 CYP21A1P NEU1 SLC44A4 LY6G6C C6orf47 TNXB SNORD48 LY6G5B HCP5 MIR6832 MIR1236 SAPCD1-AS1
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion LOC100287329 HSPA1A COL11A2 C6orf25 LY6G5C APOM BAG6 BRD2 MICB C2-AS1 LSM2 DXO HLA-DQA2 ZBTB12 TNXA HLA-DQB1-AS1 EGFL8 LY6G6E SNORD84 BTNL2 SNORD52 LTA MIR4646 RPS18 LY6G6D RNF5 ATP6V1G2-DDX39B HLA-DRB6 GPSM3 ZBTB22 KIFC1 CFB ABHD16A PSMB9 HLA-DMA MIR219A1 LTB HLA-DQB2 PPT2-EGFL8 TNF NOTCH4 NCR3 TAP2 PPT2 TAP1 SNORA38 C6orf48 CLIC1 ATP6V1G2 RING1 DDX39B HLA-DRA PRRC2A CSNK2B SKIV2L DDX39B-AS1 VPS52 MSH5 MIR6834 PFDN6 STK19 DDAH2 HLA-DMB AIF1 ZBTB9 NEU1 LY6G6C SNORD48 MIR6873 AGER MIR6833 SYNGAP1 HLA-DPA1 ATF6B HCG23 HCG24 HCP5 MIR6832 C6orf10 DAXX LOC100294145 NELFE MIR3135B HCG25 MSH5-SAPCD1 VWA7 LOC101929163 HSPA1B HSPA1L FKBPL AGPAT1 HLA-DOB HCG26 B3GALT4 SNORD117 CUTA HLA-DQB1 LOC102725068 CYP21A2 MIR5004 C4B MCCD1 LOC100507547 SAPCD1 LST1 NFKBIL1 LY6G6F GPANK1 EHMT2 MIR6721 HLA-DRB1 C4A WDR46 PSMB8-AS1 C2 SLC39A7 HLA-DPB1 HSD17B8 VARS PHF1 RXRB CYP21A1P TAPBP HLA-DRB5 SLC44A4 HLA-DQA1 C6orf47 TNXB PSMB8 HLA-DPB2 RGL2 LY6G5B HLA-DOA PPP1R2P1 PRRT1 MIR1236 PBX2 SAPCD1-AS1
dgv10404n54 Chr.6:31312550 - 32516591 on Build GRCh38 Loss LOC100287329 NELFE HSPA1A C6orf25 MSH5-SAPCD1 VWA7 LY6G5C APOM LOC101929163 BAG6 MICB HSPA1B HSPA1L C2-AS1 LSM2 DXO FKBPL AGPAT1 ZBTB12 HCG26 TNXA SNORD117 EGFL8 LY6G6E MICA SNORD84 BTNL2 LOC102725068 CYP21A2 SNORD52 LTA MIR4646 C4B LY6G6D RNF5 ATP6V1G2-DDX39B MCCD1 GPSM3 CFB ABHD16A LOC100507547 LTB HLA-B MIR6891 PPT2-EGFL8 SAPCD1 TNF LST1 NFKBIL1 LY6G6F NOTCH4 NCR3 GPANK1 EHMT2 MIR6721 PPT2 C4A SNORA38 C6orf48 CLIC1 ATP6V1G2 DDX39B HLA-DRA C2 PRRC2A CSNK2B SKIV2L DDX39B-AS1 MSH5 STK19 VARS DDAH2 AIF1 CYP21A1P NEU1 SLC44A4 LY6G6C C6orf47 TNXB SNORD48 LY6G5B AGER MIR6833 ATF6B HCG23 HCP5 PRRT1 MIR6832 MIR1236 C6orf10 PBX2 SAPCD1-AS1

Back To Top

Related Products