Hs01594228_cn

• Gene Symbol: TAF1A
• Assay Reference Genome Location: Chr.1:222563230 on build GRCh38
• Cytoband: 1q41

Target Gene Details

• Entrez Gene ID: 9015
• Gene Name: TATA-box binding protein associated factor, RNA polymerase I subunit A
• Gene Aliases: MGC:17061, RAFI48, SL1, TAFI48
• Location: Chr.1:222557902-222590096 on Build GRCh38
• Assay Gene Location: Within Exon 10

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TAF1A	NM_001201536.1	9	1237	NP_001188465.1
	NM_005681.3	9	1237	NP_005672.1
	NM_139352.2	8	1067	NP_647603.1
	XM_006711612.1	8	1286	XP_006711675.1
	XM_006711613.3	9	1250	XP_006711676.1
	XM_017002758.1	8	1286	XP_016858247.1
	XM_017002759.1	9	1206	XP_016858248.1
	XM_017002760.1	8	1014	XP_016858249.1
	AK001054.1	8	919	BAA91482.1
	AK290970.1	9	1182
	AK307882.1	2	307
	AK315740.1	9	1221
	BC013808.1	9	1217	AAH13808.1
	L39060.1	8	1052	AAA62862.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv2762168	Chr.1:222544356 - 222563512 on Build GRCh38	Loss	TAF1A HHIPL2

More Information

• Set Membership: Intragenic, Exonic, DGV Variation

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase I promoter
transcription initiation from RNA polymerase I promoter
transcription elongation from RNA polymerase I promoter
termination of RNA polymerase I transcription
transcription from RNA polymerase II promoter
positive regulation of gene expression, epigenetic

Function(s)

DNA binding
protein binding