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See other STUB1 CNV Assays ›
Gene Symbol
STUB1
Assay Reference Genome
Location

Chr.16:681472 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01602830_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 10273

Gene Name:

 STIP1 homology and U-box containing protein 1

Gene Aliases:

 CHIP, HSPABP2, NY-CO-7, SCAR16, SDCCAG7, UBOX1

Location:

 Chr.16:680111-682768 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 2 - Exon 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
STUB1 NM_001293197.1 NP_001280126.1
NM_005861.3 NP_005852.2
AF039689.1 AAC18038.1
AF129085.1 AAD33400.1
AF217968.1 AAG17211.1
AF432221.1 AAL99927.1
BC007545.1 AAH07545.1
BC017178.1 AAH17178.1
BC022788.1 AAH22788.1
BC063617.1 AAH63617.1
CB145452.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv827480 Chr.16:672775 - 685288 on Build GRCh38 Gain RHOT2 JMJD8 RHBDL1 STUB1 LOC105371184 WDR24
nsv482181 Chr.16:680115 - 682767 on Build GRCh38 Gain JMJD8 STUB1
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PKD1 RHBDF1 SSTR5 SNHG9 METTL26 RHBDL1 PRR35 TPSAB1 SPSB3 SLC9A3R2 TSC2 LOC105371049 NHLRC4 HAGH WDR90 ABCA17P TRAF7 TELO2 RPL3L LOC105371046 MIR1225 CHTF18 TBC1D24 LUC7L IFT140 SNORA10 SNRNP25 FAHD1 ECI1 NTN3 ERVK13-1 CRAMP1 NUBP2 CCNF HAGHL SNORD60 RPL23AP5 NME4 CLCN7 FBXL16 LINC00235 LOC106660606 PRR25 AXIN1 LOC100134368 LOC105371045 FAM234A MIR4717 METRN SNHG19 CEMP1 CCDC154 MIR3177 MSLN NPRL3 HBM MIR3176 LOC729652 SNORA64 C16orf59 DECR2 TPSB2 POLR3K MRPS34 LOC101929280 DDX11L10 MIR662 PDIA2 MIR3677 MSRB1 MIR6767 TSR3 ARHGDIG RHOT2 EME2 GNPTG NME3 SNORA78 NDUFB10 E4F1 SOX8 PDPK1 LMF1 PIGQ LOC107987233 TMEM8A HBQ1 TPSD1 RGS11 NTHL1 BRICD5 MCRIP2 NARFL ATP6V0C JMJD8 ZNF598 UBE2I HBZ GNG13 WDR24 UNKL MIR4516 MEIOB MIR6768 LINC00254 STUB1 PRSS27 TMEM204 PGP RAB26 C1QTNF8 C16orf91 CAPN15 MIR3180-5 PRSS29P CCDC78 LOC105371038 HS3ST6 HBA2 HBA1 MIR6511B1 RPUSD1 TPSG1 LOC105371184 HN1L MIR6859-4 KCTD5 MLST8 RNPS1 AMDHD2 SSTR5-AS1 SYNGR3 RAB11FIP3 BAIAP3 LOC652276 DNASE1L2 PTX4 FAM173A TBL3 CACNA1H MRPL28 GFER LMF1-AS1 WASIR2 WFIKKN1 MPG ABCA3 RAB40C CASKIN1 MIR940 RNF151 MAPK8IP3 FLJ42627 IGFALS RPS2 MIR5587 LOC107984876 MIR3178 LOC105371047 LOC100287175 NOXO1 NPW
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss FBXL16 RPUSD1 LINC00235 PRR25 PIGQ LOC107987233 METTL26 RHBDL1 PRR35 LOC105371184 METRN NHLRC4 MSLN MCRIP2 NARFL JMJD8 RAB11FIP3 WDR90 MIR3176 GNG13 WDR24 FAM173A CHTF18 LOC101929280 MIR662 WFIKKN1 RAB40C STUB1 MIR5587 CAPN15 RHOT2 CCDC78 HAGHL LOC105371038 LOC100287175
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss FBXL16 RPUSD1 LINC00235 PRR25 PIGQ LOC107987233 METTL26 RHBDL1 PRR35 LOC105371184 METRN NHLRC4 MSLN MCRIP2 NARFL JMJD8 RAB11FIP3 WDR90 MIR3176 GNG13 WDR24 FAM173A CHTF18 LOC101929280 MIR662 WFIKKN1 RAB40C STUB1 MIR5587 CAPN15 RHOT2 CCDC78 HAGHL LOC105371038 LOC100287175
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion SOX8 LMF1 FBXL16 RPUSD1 LINC00235 PRR25 PIGQ LOC107987233 SSTR5 METTL26 RHBDL1 PRR35 LOC105371184 METRN NHLRC4 MSLN SSTR5-AS1 MCRIP2 NARFL JMJD8 RAB11FIP3 WDR90 MIR3176 GNG13 WDR24 FAM173A CHTF18 LMF1-AS1 LOC101929280 MIR662 WFIKKN1 RAB40C STUB1 MIR5587 C1QTNF8 CAPN15 LOC107984876 RHOT2 CCDC78 HAGHL LOC105371038 LOC100287175
nsv571012 Chr.16:583354 - 748489 on Build GRCh38 Loss FBXL16 PIGQ LOC101929280 WFIKKN1 METTL26 RAB40C RHBDL1 STUB1 LOC105371184 METRN RHOT2 MCRIP2 NARFL CCDC78 JMJD8 HAGHL LOC105371038 WDR90 LOC100287175 WDR24 FAM173A
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication FBXL16 RPUSD1 PIGQ METTL26 RHBDL1 LOC105371184 METRN MSLN MCRIP2 NARFL JMJD8 WDR90 GNG13 WDR24 FAM173A CHTF18 LOC101929280 MIR662 WFIKKN1 RAB40C STUB1 RHOT2 CCDC78 HAGHL LOC105371038 LOC100287175
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication FBXL16 RPUSD1 LINC00235 PRR25 PIGQ LOC107987233 METTL26 RHBDL1 PRR35 LOC105371184 METRN NHLRC4 MSLN MCRIP2 NARFL JMJD8 RAB11FIP3 WDR90 MIR3176 GNG13 WDR24 FAM173A CHTF18 LOC101929280 MIR662 WFIKKN1 RAB40C STUB1 MIR5587 CAPN15 RHOT2 CCDC78 HAGHL LOC105371038 LOC100287175
nsv516590 Chr.16:605686 - 748489 on Build GRCh38 Loss FBXL16 WFIKKN1 METTL26 RAB40C RHBDL1 STUB1 LOC105371184 METRN RHOT2 MCRIP2 NARFL CCDC78 JMJD8 HAGHL LOC105371038 WDR90 LOC100287175 WDR24 FAM173A
nsv457310 Chr.16:651656 - 681725 on Build GRCh38 Loss RHOT2 JMJD8 RHBDL1 STUB1 WDR90 LOC105371184
nsv471065 Chr.16:629411 - 739761 on Build GRCh38 Gain FBXL16 WFIKKN1 METTL26 RHBDL1 STUB1 LOC105371184 METRN RHOT2 MCRIP2 NARFL CCDC78 JMJD8 HAGHL LOC105371038 WDR90 LOC100287175 WDR24 FAM173A
dgv4825n54 Chr.16:661905 - 761746 on Build GRCh38 Loss FBXL16 RHBDL1 STUB1 LOC105371184 METRN RHOT2 MSLN NARFL CCDC78 JMJD8 HAGHL WDR90 WDR24 FAM173A
nsv9321 Chr.16:638149 - 804328 on Build GRCh38 Gain+Loss CHTF18 FBXL16 RPUSD1 MIR662 RHBDL1 STUB1 LOC105371184 METRN RHOT2 MSLN MCRIP2 NARFL CCDC78 JMJD8 HAGHL LOC105371038 WDR90 LOC100287175 GNG13 WDR24 FAM173A

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

ubiquitin-protein ligase

Gene Ontology Categories:

Function(s) Process(es)


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