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See other NPDC1 CNV Assays ›
Gene Symbol
NPDC1
Assay Reference Genome
Location

Chr.9:137043083 on build GRCh38
Cytoband
9q34.3
Assay ID Hs01610129_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 56654

Gene Name:

 neural proliferation, differentiation and control 1

Gene Aliases:

 CAB, CAB-, CAB-1, CAB1, NPDC-1

Location:

 Chr.9:137039457-137046224 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
NPDC1 NM_015392.3 NP_056207.3
AF272357.1 AAF76225.1
AF283247.1 AAF82603.1
AF285836.1 AAK27328.1
AF327349.1 AAL56010.1
AK054950.1 1 1010
AK074793.1 BAC11212.1
AK225091.1
BC004217.2 AAH04217.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
dgv13007n54 Chr.9:136966179 - 137173890 on Build GRCh38 Loss LRRC26 CLIC3 C9orf142 NPDC1 MIR3621 MAN1B1-AS1 LCNL1 PTGDS GRIN1 ABCA2 PRR31 TMEM210 MAN1B1 UAP1L1 LOC101930307 DPP7 C9orf139 ENTPD2 SAPCD2 FUT7
nsv524322 Chr.9:136795692 - 137482216 on Build GRCh38 Loss NDOR1 NPDC1 MAN1B1-AS1 MIR4479 C9orf172 NSMF TMEM210 MAN1B1 ENTPD2 CCDC183 CLIC3 MIR4292 NELFB PTGDS PNPLA7 GRIN1 ABCA2 TUBB4B UAP1L1 RNF224 STPG3 LRRC26 TPRN C9orf142 MIR7114 MIR3621 ANAPC2 LCN12 TMEM203 PRR31 ENTPD8 CYSRT1 RABL6 EDF1 C9orf173-AS1 MAMDC4 NRARP EXD3 LCNL1 NOXA1 SLC34A3 TRAF2 RNF208 TOR4A FAM166A C8G PHPT1 FBXW5 LOC101930307 CCDC183-AS1 DPP7 C9orf139 SSNA1 SAPCD2 FUT7
nsv951206 Chr.9:136944849 - 137114548 on Build GRCh38 Deletion CLIC3 C9orf142 NPDC1 MAN1B1-AS1 LCNL1 PTGDS LCN12 ABCA2 PRR31 C8G MAN1B1 UAP1L1 LOC101930307 DPP7 C9orf139 ENTPD2 SAPCD2 FUT7
nsv469918 Chr.9:136359865 - 137173890 on Build GRCh38 Loss NPDC1 SEC16A MAN1B1-AS1 MIR6722 MIR4479 C9orf172 TMEM210 MAN1B1 SNORA17A ENTPD2 CCDC183 NALT1 MIR126 LCN10 CLIC3 LOC100128593 MIR4292 AGPAT2 PTGDS MIR4673 GRIN1 ABCA2 INPP5E UAP1L1 LINC01451 MIR4674 TMEM141 SNHG7 LRRC26 C9orf142 SNORA17B DNLZ NOTCH1 MIR3621 LCN12 EGFL7 PRR31 RABL6 EDF1 LCN6 MAMDC4 HSPC324 LCNL1 SNAPC4 TRAF2 C9orf163 C8G PHPT1 FBXW5 SDCCAG3 LOC101930307 CCDC183-AS1 DPP7 PMPCA C9orf139 CARD9 LCN8 SAPCD2 FAM69B LCN15 FUT7
nsv616005 Chr.9:137036493 - 137173890 on Build GRCh38 Loss LRRC26 NPDC1 MIR3621 MAN1B1-AS1 GRIN1 TMEM210 MAN1B1 UAP1L1 LOC101930307 DPP7 C9orf139 ENTPD2 SAPCD2
esv2761561 Chr.9:137030185 - 137191593 on Build GRCh38 Gain LRRC26 NPDC1 MIR3621 MAN1B1-AS1 ANAPC2 GRIN1 TMEM210 MAN1B1 UAP1L1 LOC101930307 DPP7 C9orf139 ENTPD2 SSNA1 SAPCD2 FUT7
nsv616004 Chr.9:137014976 - 137053021 on Build GRCh38 Loss NPDC1 C9orf139 ENTPD2 ABCA2 FUT7
esv2422220 Chr.9:136584135 - 137350098 on Build GRCh38 Deletion NDOR1 NPDC1 MAN1B1-AS1 MIR6722 MIR4479 C9orf172 TMEM210 MAN1B1 SNORA17A ENTPD2 CCDC183 MIR126 LCN10 CLIC3 LOC100128593 MIR4292 NELFB AGPAT2 PTGDS GRIN1 ABCA2 TUBB4B UAP1L1 RNF224 LINC01451 STPG3 TMEM141 SNHG7 LRRC26 TPRN C9orf142 SNORA17B MIR3621 ANAPC2 LCN12 TMEM203 EGFL7 PRR31 CYSRT1 RABL6 EDF1 LCN6 C9orf173-AS1 MAMDC4 HSPC324 NRARP EXD3 LCNL1 SLC34A3 TRAF2 RNF208 TOR4A FAM166A C8G PHPT1 FBXW5 LOC101930307 CCDC183-AS1 DPP7 C9orf139 SSNA1 LCN8 SAPCD2 FAM69B LCN15 FUT7

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Gene Ontology Categories:

Process(es)


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