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See other PRPF6 CNV Assays ›
Gene Symbol
PRPF6
Assay Reference Genome
Location

Chr.20:63983065 on build GRCh38
Cytoband
20q13.33
Assay ID Hs01629398_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 24148

Gene Name:

 pre-mRNA processing factor 6

Gene Aliases:

 ANT-1, ANT1, C20orf14, Prp6, RP60, SNRNP102, TOM, U5-102K, hPrp6

Location:

 Chr.20:63981069-64033100 on Build GRCh38

Assay Gene Location:

 Overlaps Intron 1 - Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PRPF6 NM_012469.3 NP_036601.2
XM_006723769.2 XP_006723832.1
AB019219.1 BAA37140.1
AF026031.1 AAD01798.1
AF221842.1 AAF66128.1
AK001554.1
AK225993.1
AK314310.1
BC001666.2 AAH01666.1
BI562505.1
BP366197.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv509784 Chr.20:63824382 - 63983325 on Build GRCh38 Insertion MIR941-1 MIR941-5 ZBTB46 DNAJC5 MIR647 ABHD16B UCKL1 MIR941-4 PRPF6 C20orf181 ZNF512B UCKL1-AS1 MIR1914 MIR941-3 MIR941-2 SAMD10 TPD52L2
nsv586703 Chr.20:63964886 - 64095388 on Build GRCh38 Loss LKAAEAR1 PRPF6 ZNF512B OPRL1 TCEA2 MIR6813 SAMD10 RGS19 LINC00176 SOX18
nsv428381 Chr.20:63583375 - 64334167 on Build GRCh38 Gain+Loss RTEL1 LINC00266-1 MIR941-5 OPRL1 SLC2A4RG LIME1 UCKL1 MIR941-4 PRPF6 C20orf181 ARFRP1 MIR1914 MIR941-3 TCEA2 LOC100505771 MIR6813 STMN3 MYT1 GMEB2 TNFRSF6B LKAAEAR1 MIR941-1 ZBTB46 ZBTB46-AS1 RTEL1-TNFRSF6B ZGPAT DNAJC5 MIR647 ABHD16B LINC00176 SOX18 NPBWR2 PCMTD2 ZNF512B UCKL1-AS1 MIR941-2 SAMD10 RGS19 TPD52L2
nsv469773 Chr.20:63845428 - 64039312 on Build GRCh38 Gain MIR941-1 MIR941-5 DNAJC5 MIR647 ABHD16B LINC00176 UCKL1 MIR941-4 PRPF6 C20orf181 ZNF512B UCKL1-AS1 MIR1914 MIR941-3 MIR941-2 SAMD10 TPD52L2
nsv1160691 Chr.20:63943650 - 64055199 on Build GRCh38 Deletion UCKL1 PRPF6 ZNF512B UCKL1-AS1 TCEA2 SAMD10 LINC00176 SOX18

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