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See other PIGQ CNV Assays ›
Gene Symbol
PIGQ
Assay Reference Genome
Location

Chr.16:580946 on build GRCh38
Cytoband
16p13.3
Assay ID Hs01654473_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9091

Gene Name:

 phosphatidylinositol glycan anchor biosynthesis class Q

Gene Aliases:

 GPI1, c407A10.1

Location:

 Chr.16:569968-584136 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 9 - Intron 9
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PIGQ NM_004204.3 NP_004195.2
NM_148920.2 NP_683721.1
AB003723.1 BAA24948.1
AF030177.1 AAC32661.1
AK055163.1
AK300297.1
AK314361.1
BC006377.2 AAH06377.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv833113 Chr.16:506513 - 628160 on Build GRCh38 Loss MIR5587 CAPN15 LOC101929280 RAB40C RAB11FIP3 LOC107987233 NHLRC4 PIGQ PRR35 MIR3176 LINC00235
esv3637579 Chr.16:574322 - 585512 on Build GRCh38 Loss PIGQ
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication ABCA3 LOC107984876 NHLRC4 KCTD5 HAGHL HS3ST6 RGS11 PKD1 MSLN MRPL28 PRR35 MEIOB SSTR5 MIR662 MIR4717 LMF1 LOC105371047 PRSS29P NTHL1 CCNF FBXL16 RNPS1 HBQ1 MIR3177 WASIR2 SPSB3 SNORD60 MRPS34 MIR1225 C1QTNF8 RHBDF1 NME3 TMEM8A CAPN15 FAHD1 RAB26 CEMP1 FLJ42627 SNORA64 NUBP2 NOXO1 DECR2 HN1L PTX4 TELO2 LOC106660606 STUB1 RPL23AP5 SNORA78 WDR90 TRAF7 GNPTG MCRIP2 PRR25 TBL3 LOC105371049 TPSD1 LOC105371038 SNRNP25 TSC2 NME4 C16orf91 UNKL LOC105371045 BRICD5 MIR3178 C16orf59 ATP6V0C MAPK8IP3 LOC107987233 MIR6767 FAM173A EME2 FAM234A RPL3L MLST8 HBA2 SNORA10 WDR24 HAGH RHOT2 HBA1 LUC7L HBM LMF1-AS1 RPS2 AXIN1 RNF151 GNG13 DDX11L10 MIR4516 SSTR5-AS1 TBC1D24 ABCA17P NPW MIR3677 RHBDL1 PGP TPSAB1 NARFL MSRB1 LOC101929280 SYNGR3 ARHGDIG TMEM204 AMDHD2 CLCN7 DNASE1L2 MIR6768 MIR3176 METTL26 TPSB2 BAIAP3 WFIKKN1 NDUFB10 UBE2I RAB11FIP3 MPG LOC105371184 MIR6511B1 MIR6859-4 SNHG9 CCDC78 NPRL3 LOC100134368 LOC729652 CCDC154 METRN LINC00254 RAB40C CACNA1H PRSS27 ZNF598 SOX8 SNHG19 TSR3 PDPK1 MIR5587 LOC105371046 MIR940 IGFALS POLR3K TPSG1 JMJD8 ERVK13-1 PDIA2 LINC00235 E4F1 GFER SLC9A3R2 PIGQ HBZ RPUSD1 CASKIN1 NTN3 IFT140 CRAMP1 LOC100287175 CHTF18 LOC652276 ECI1 MIR3180-5
nsv471063 Chr.16:520623 - 852322 on Build GRCh38 Loss METRN GNG13 RAB40C STUB1 NHLRC4 RHBDL1 HAGHL WDR90 NARFL MCRIP2 PRR25 MIR5587 MSLN LOC105371038 LOC101929280 PRR35 MIR662 JMJD8 MIR3176 METTL26 LINC00235 FBXL16 WFIKKN1 RAB11FIP3 LOC107987233 FAM173A PIGQ RPUSD1 LOC105371184 WDR24 CCDC78 CAPN15 LOC100287175 RHOT2 CHTF18
nsv526903 Chr.16:451362 - 810673 on Build GRCh38 Loss METRN GNG13 RAB40C STUB1 NHLRC4 RHBDL1 HAGHL WDR90 NARFL MCRIP2 PRR25 MIR5587 MSLN LOC105371038 LOC101929280 PRR35 MIR662 JMJD8 MIR3176 METTL26 LINC00235 FBXL16 WFIKKN1 RAB11FIP3 LOC107987233 FAM173A PIGQ RPUSD1 LOC105371184 WDR24 CCDC78 CAPN15 LOC100287175 RHOT2 CHTF18
nsv952898 Chr.16:495001 - 1132900 on Build GRCh38 Deletion METRN GNG13 LOC107984876 SSTR5-AS1 RAB40C STUB1 NHLRC4 RHBDL1 HAGHL WDR90 NARFL SOX8 MCRIP2 PRR25 MIR5587 MSLN LOC105371038 LOC101929280 PRR35 SSTR5 MIR662 JMJD8 MIR3176 METTL26 LMF1 LINC00235 FBXL16 WFIKKN1 RAB11FIP3 LOC107987233 FAM173A PIGQ RPUSD1 LOC105371184 WDR24 C1QTNF8 CCDC78 CAPN15 LOC100287175 RHOT2 CHTF18 LMF1-AS1
dgv4823n54 Chr.16:562698 - 662867 on Build GRCh38 Loss MCRIP2 WFIKKN1 LOC105371038 LOC101929280 RAB40C LOC107987233 LOC100287175 NHLRC4 PIGQ PRR35 WDR90 METTL26
nsv457304 Chr.16:554554 - 611142 on Build GRCh38 Gain CAPN15 LOC101929280 RAB40C LOC107987233 NHLRC4 PIGQ PRR35
nsv1160326 Chr.16:580902 - 804689 on Build GRCh38 Duplication METRN GNG13 RAB40C STUB1 RHBDL1 HAGHL WDR90 NARFL MCRIP2 MSLN LOC105371038 LOC101929280 MIR662 JMJD8 METTL26 FBXL16 WFIKKN1 FAM173A PIGQ RPUSD1 LOC105371184 WDR24 CCDC78 LOC100287175 RHOT2 CHTF18
nsv1160325 Chr.16:506925 - 836376 on Build GRCh38 Duplication METRN GNG13 RAB40C STUB1 NHLRC4 RHBDL1 HAGHL WDR90 NARFL MCRIP2 PRR25 MIR5587 MSLN LOC105371038 LOC101929280 PRR35 MIR662 JMJD8 MIR3176 METTL26 LINC00235 FBXL16 WFIKKN1 RAB11FIP3 LOC107987233 FAM173A PIGQ RPUSD1 LOC105371184 WDR24 CCDC78 CAPN15 LOC100287175 RHOT2 CHTF18

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More Information


Set Membership:

 Intragenic Non-exonic DGV Variation

Panther Classification:

Molecular Function -

glycosyltransferase

Gene Ontology Categories:

Function(s) Process(es)


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