Hs01655208_cn

• Gene Symbol: NPDC1
• Assay Reference Genome Location: Chr.9:137039471 on build GRCh38
• Cytoband: 9q34.3

Target Gene Details

• Entrez Gene ID: 56654
• Gene Name: neural proliferation, differentiation and control 1
• Gene Aliases: CAB, CAB-, CAB-1, CAB1, NPDC-1
• Location: Chr.9:137039457-137046224 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 9

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
NPDC1	NM_015392.3			NP_056207.3
	AF272357.1			AAF76225.1
	AF283247.1			AAF82603.1
	AF285836.1			AAK27328.1
	AF327349.1			AAL56010.1
	AK054950.1
	AK074793.1			BAC11212.1
	AK225091.1
	AL050221.1			CAB43321.1
	BC004217.2			AAH04217.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv13007n54	Chr.9:136966179 - 137173890 on Build GRCh38	Loss	C9orf139 FUT7 DPP7 UAP1L1 LRRC26 NPDC1 PTGDS MAN1B1-AS1 LCNL1 MAN1B1 ABCA2 TMEM210 C9orf142 LOC101930307 MIR3621 SAPCD2 GRIN1 CLIC3 ENTPD2 PRR31
nsv524322	Chr.9:136795692 - 137482216 on Build GRCh38	Loss	TRAF2 FUT7 DPP7 PHPT1 MAMDC4 LCNL1 PNPLA7 LCN12 MIR7114 C9orf172 SSNA1 RNF208 TOR4A RNF224 TUBB4B C8G NELFB NRARP SLC34A3 C9orf142 RABL6 CYSRT1 FBXW5 EXD3 ENTPD8 ANAPC2 NDOR1 MIR4292 LRRC26 NPDC1 MAN1B1-AS1 MAN1B1 ABCA2 TMEM210 C9orf173-AS1 EDF1 LOC101930307 CCDC183 CCDC183-AS1 SAPCD2 CLIC3 PRR31 C9orf139 NSMF UAP1L1 TPRN FAM166A PTGDS STPG3 MIR3621 GRIN1 ENTPD2 NOXA1 MIR4479 TMEM203
nsv951206	Chr.9:136944849 - 137114548 on Build GRCh38	Deletion	C9orf139 FUT7 DPP7 UAP1L1 C8G NPDC1 PTGDS MAN1B1-AS1 LCNL1 MAN1B1 ABCA2 C9orf142 LOC101930307 LCN12 SAPCD2 CLIC3 ENTPD2 PRR31
nsv469918	Chr.9:136359865 - 137173890 on Build GRCh38	Loss	LCN6 SEC16A TRAF2 FUT7 INPP5E DPP7 SNORA17A PHPT1 MAMDC4 LCNL1 MIR6722 TMEM141 DNLZ LCN12 MIR4674 MIR4673 SNHG7 C9orf172 C8G C9orf163 CARD9 SDCCAG3 C9orf142 RABL6 FBXW5 AGPAT2 NOTCH1 HSPC324 MIR4292 LRRC26 NPDC1 MAN1B1-AS1 MAN1B1 ABCA2 TMEM210 LCN8 EDF1 LOC101930307 CCDC183 CCDC183-AS1 SAPCD2 LCN15 CLIC3 LINC01451 PRR31 NALT1 C9orf139 UAP1L1 EGFL7 LCN10 SNAPC4 FAM69B PTGDS MIR3621 LOC100128593 GRIN1 ENTPD2 MIR4479 PMPCA SNORA17B MIR126
nsv616005	Chr.9:137036493 - 137173890 on Build GRCh38	Loss	C9orf139 DPP7 UAP1L1 LRRC26 NPDC1 MAN1B1-AS1 MAN1B1 TMEM210 LOC101930307 MIR3621 SAPCD2 GRIN1 ENTPD2
esv2761561	Chr.9:137030185 - 137191593 on Build GRCh38	Gain	C9orf139 FUT7 DPP7 UAP1L1 LRRC26 NPDC1 MAN1B1-AS1 MAN1B1 TMEM210 LOC101930307 MIR3621 SAPCD2 GRIN1 ENTPD2 ANAPC2 SSNA1
nsv616004	Chr.9:137014976 - 137053021 on Build GRCh38	Loss	C9orf139 FUT7 NPDC1 ENTPD2 ABCA2
esv2422220	Chr.9:136584135 - 137350098 on Build GRCh38	Deletion	LCN6 TRAF2 FUT7 DPP7 SNORA17A PHPT1 MAMDC4 LCNL1 MIR6722 TMEM141 LCN12 SNHG7 C9orf172 SSNA1 RNF208 TOR4A RNF224 TUBB4B C8G NELFB NRARP SLC34A3 C9orf142 RABL6 CYSRT1 FBXW5 AGPAT2 EXD3 ANAPC2 HSPC324 NDOR1 MIR4292 LRRC26 NPDC1 MAN1B1-AS1 MAN1B1 ABCA2 TMEM210 LCN8 C9orf173-AS1 EDF1 LOC101930307 CCDC183 CCDC183-AS1 SAPCD2 LCN15 CLIC3 LINC01451 PRR31 C9orf139 UAP1L1 EGFL7 LCN10 TPRN FAM69B FAM166A PTGDS STPG3 MIR3621 LOC100128593 GRIN1 ENTPD2 MIR4479 TMEM203 SNORA17B MIR126

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Gene Ontology Categories:

Function(s)

protein binding