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See other ATP2B2 CNV Assays ›
Gene Symbol
ATP2B2
Assay Reference Genome
Location

Chr.3:10327912 on build GRCh38
Cytoband
3p25.3
Assay ID Hs01665346_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 491

Gene Name:

 ATPase plasma membrane Ca2+ transporting 2

Gene Aliases:

 PMCA2, PMCA2a, PMCA2i

Location:

 Chr.3:10324023-10707962 on Build GRCh38

Assay Gene Location:

 Within Exon 32
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2B2 NM_001001331.2 23 5073 NP_001001331.1
NM_001683.3 20 4938 NP_001674.2
XM_005265179.4 25 5257 XP_005265236.1
XM_006713175.3 25 5141 XP_006713238.1
XM_011533752.2 23 5046 XP_011532054.1
XM_017006481.1 26 5384 XP_016861970.1
XM_017006482.1 23 5075 XP_016861971.1
XM_017006483.1 21 5085 XP_016861972.1
XM_017006484.1 23 5048 XP_016861973.1
XM_017006485.1 24 5352 XP_016861974.1
XM_017006486.1 25 5407 XP_016861975.1
XM_017006487.1 22 5005 XP_016861976.1
XM_017006489.1 23 5181 XP_016861978.1
XM_017006491.1 22 5271 XP_016861980.1
XM_017006492.1 24 5266 XP_016861981.1
AB210008.1 20 5011
CA391502.1 1 332

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion IRAK2 FANCD2 GHRL VHL SLC6A1-AS1 VGLL4 GHRLOS MIR885 ATP2B2-IT2 LOC101927467 ATG7 SEC13 FANCD2OS BRK1 TAMM41 ATP2B2 LINC00606 MIR378B TATDN2 HRH1 SLC6A11 SLC6A1 LINC00852
nsv508903 Chr.3:10275353 - 10401894 on Build GRCh38 Insertion GHRL ATP2B2 GHRLOS MIR378B MIR885 TATDN2 LINC00852 SEC13
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion FANCD2 VHL VGLL4 GHRLOS MIR885 ATG7 FANCD2P2 SEC13 FANCD2OS BRK1 ATP2B2 LINC00606 MIR378B HRH1 SLC6A11 SLC6A1 LINC00852 LOC401052 IRAK2 EMC3 GHRL SLC6A1-AS1 ATP2B2-IT2 LOC101927467 CIDECP TAMM41 TATDN2
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion IRAK2 FANCD2 GHRL VHL SLC6A1-AS1 VGLL4 GHRLOS MIR885 ATP2B2-IT2 LOC101927467 ATG7 FANCD2P2 SEC13 FANCD2OS BRK1 TAMM41 ATP2B2 LINC00606 MIR378B TATDN2 HRH1 SLC6A11 SLC6A1 LINC00852
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion IRAK2 FANCD2 GHRL VHL SLC6A1-AS1 VGLL4 GHRLOS MIR885 ATP2B2-IT2 LOC101927467 ATG7 FANCD2P2 SEC13 FANCD2OS BRK1 TAMM41 ATP2B2 LINC00606 MIR378B TATDN2 HRH1 SLC6A11 SLC6A1 LINC00852
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion FANCD2 VHL EMC3-AS1 VGLL4 GHRLOS MIR885 ATG7 FANCD2P2 SEC13 FANCD2OS BRK1 ATP2B2 LINC00606 MIR378B HRH1 SLC6A11 SLC6A1 LINC00852 LOC401052 IRAK2 EMC3 GHRL SLC6A1-AS1 ATP2B2-IT2 LOC101927467 CIDECP TAMM41 TATDN2
nsv819083 Chr.3:10327806 - 10328399 on Build GRCh38 Loss ATP2B2

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